RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 P01795 144 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Kcne1P23299 129 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Hsd3b2P26149 373 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Mst1P26928 716 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Drd3P30728 446 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Hoxa10P31310 416 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gstm5P48774 224 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 DbtP53395 482 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Crmp1P97427 572 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gdf3Q07104 366 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 SrmsQ62270 496 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr967Q7TRA6 310 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Znf8Q8BGV5 572 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 SargQ8BI29 606 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 C130079G13RikQ8BUY2 280 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gm5111Q8C9M4 190 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 4933402N03RikQ8CDT9 329 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 GabrpQ8QZW7 440 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Asb10Q91ZT7 467 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Serpinb11Q9CQV3 388 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gkn3Q9D0T7 191 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Arpc5lQ9D898 153 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gm4869A0A1B0GSG7 984 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 S100a2J3QMC7 104 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 OtpO09113 325 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Il9P15247 144 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 VtnP29788 478 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 GcgP55095 180 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 EbpP70245 230 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Tcfl5Q32NY8 489 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gm7534Q3UU21 679 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Dnaaf3Q3UYV8 586 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Mgat4bQ812F8 548 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Lkaaear1Q8BIG2 198 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Spata2lQ8BNN1 426 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Vmn1r212Q8R268 357 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Polr2hQ923G2 150 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Spred1Q924S8 444 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Rsl24d1Q99L28 163 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Ube2fQ9CY34 185 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Arl5bQ9D4P0 179 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Krt81Q9ERE2 481 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 GmfgQ9ERL7 142 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Trappc4Q9ES56 219 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Xpr1Q9Z0U0 695 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Phf1Q9Z1B8 559 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gm21936A0A1Y7VJE9 144 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gm5788A0A1Y7VK80 144 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr1097A2AVA9 315 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Ccdc7bE9Q9Y3 381 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gm21319F6YNI8 144 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Zfp870J3QMA4 560 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gm5039J3QNT6 144 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Ntn1O09118 604 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 H2-ObO35424 271 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Rad51dO55230 329 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Csf1P07141 552 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Irf1P15314 329 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Vipr2P41588 437 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Nat2P50295 290 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 AgrpP56473 131 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 SnrpgP62309 76 aaKnown RBP7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Ctf2P83714 204 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gcnt2P97402 401 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gm2016Q3TQZ4 144 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Shisa6Q3UH99 525 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Ankrd27Q3UMR0 1048 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gm8332Q3UTA4 144 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr332Q5NC45 344 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Vmn1r196Q5SVD5 301 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Snta1Q61234 503 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Kng2Q6S9I3 644 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Pgr15lQ80T54 456 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 DgkzQ80UP3 929 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 NanogQ80Z64 305 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 ChdhQ8BJ64 596 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Atp6v1g3Q8BMC1 118 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gm5662Q8BX20 144 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Slc25a1Q8JZU2 311 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Abhd14bQ8VCR7 210 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Acer2Q8VD53 275 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr1443Q8VFW8 312 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Vmn1r43Q8VIC9 329 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Mrpl43Q99N89 183 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 S100a14Q9D2Q8 104 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Acp1Q9D358 158 aa7.89□□□□□ -1.15
Trim39-201ENSMUST00000042717 Trip12G5E870 2025 aaKnown RBP7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 A0A286YDU1 74 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gm10406A6NAS4 205 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gm4177D3YTX5 305 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gm8871F7AXK2 190 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Vmn1r127K7N6J5 305 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Vmn1r142K7N6U0 305 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Vmn1r94K7N6X3 305 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Vmn1r115K7N6Y3 295 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Vmn1r159K7N701 305 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gm3667K7N757 205 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Nkx2-6P43688 289 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gch1Q05915 241 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gm3558Q5FWC9 205 aa7.88□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms