RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Slc38a8Q5HZH7 432 aa9.23□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Lcn4Q62472 185 aa9.23□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Znf770Q8BIQ8 705 aa9.23□□□□□ -0.93
Ldlr-201ENSMUST00000034713 NraddQ8CJ26 228 aa9.23□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Swsap1Q8VCI7 278 aa9.23□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Olfr1099Q8VG37 312 aa9.23□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Vsx1Q91V10 363 aa9.23□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Nt5dc2Q91X76 390 aaKnown RBP9.23□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Atg5Q99J83 275 aa9.23□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Gdpd3Q99LY2 330 aa9.23□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Ubqln4Q99NB8 596 aa9.23□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Ifitm3Q9CQW9 137 aa9.23□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Jam3Q9D8B7 310 aa9.23□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Elp4Q9ER73 422 aa9.23□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Moap1Q9ERH6 352 aa9.23□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Nek7Q9ES74 302 aa9.23□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Tas2r103Q9JKA3 312 aa9.23□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Hebp2Q9WU63 205 aa9.23□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Ppp1r17Q9Z2E4 159 aa9.23□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Ttc3O88196 1979 aaKnown RBP9.23□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Olfr1432A0A140LHS7 346 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Gm4131A0A140LJ24 318 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Vmn1r9A2RST7 299 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Zfp964B2RR88 472 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Esp36G3UZD8 160 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Ms4a18J3QN01 344 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Gm4141K9J7H2 306 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Agpat1O35083 285 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Mmp12P34960 473 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 TesP47226 423 aaKnown RBP9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Rnf149Q3U2C5 394 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Mmp25Q3U435 615 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Fbxw16Q497Z0 464 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Kng2Q6S9I3 644 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Actbl2Q8BFZ3 376 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 NdnfQ8C119 568 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Commd1Q8K4M5 188 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Vmn1r87Q8R255 295 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Olfr1020Q8VFK7 317 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Lpcat3Q91V01 487 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Aaed1Q9D1A0 226 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 FtmtQ9D5H4 237 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Zdhhc4Q9D6H5 343 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Ift43Q9DA69 206 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Ccdc54Q9DAL3 329 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Sh3bgrlQ9JJU8 114 aaKnown RBP9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Insm2Q9JMC2 493 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Gm17087V9GXQ2 156 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Vmn1r10W4VSP8 311 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Nup205A0A0J9YUD5 2061 aaKnown RBP9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 A0A1L1STL9 112 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Esp15A8R0U8 85 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Olfr619E9PV95 320 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Vmn2r56E9Q4U5 779 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Olfr1360K9J6X0 313 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 EmdO08579 259 aaKnown RBP9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 PrkacaP05132 351 aaKnown RBP9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Il13P20109 131 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Fabp7P51880 132 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Dbx1P52950 335 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Doc2bP70169 412 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Pgap2Q3TQR0 254 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Q3V0E1 1183 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Klf4Q60793 483 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Igfbp7Q61581 281 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Cr1lQ64735 483 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Krba1Q6NXZ1 1043 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Stoml3Q6PE84 287 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Il20raQ6PHB0 546 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Olfr1359Q7TQU5 313 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Rhox11Q810N8 206 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Sdhaf2Q8C6I2 164 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Adam4Q8CGQ2 763 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Fn3krpQ8K274 309 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Utp4Q8R2N2 686 aaKnown RBP9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Olfr308Q8VFP2 308 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Olfr283Q8VGU2 309 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 TMEM121BQ99MX7 572 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Olfr930Q9EQ99 308 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Mfap5Q9QZJ6 164 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Eif2s3xQ9Z0N1 472 aaKnown RBP9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Eif2s3yQ9Z0N2 472 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Ubl3Q9Z2M6 117 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Fthl17bA2AHC5 176 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Fthl17cA2AHC6 176 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Chst13D3Z6E3 336 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Vmn1r13G5E8I3 300 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Ptger4P32240 513 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Adrb1P34971 466 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Fthl17dQ3SXD1 176 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Fthl17fQ3SXD2 176 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Sdc3Q64519 442 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 D11Wsu47eQ6PIX9 558 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Prss43Q76HL1 382 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Olfr1166Q7TR27 316 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Nhlrc2Q8BZW8 725 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Brinp1Q920P3 760 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Macrod1Q922B1 323 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Fthl17Q99MX2 176 aa9.22□□□□□ -0.93
Ldlr-201ENSMUST00000034713 Ceacam20Q9D2Z1 577 aa9.22□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms