RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 SCN2AQ99250 2005 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 TRBV5-5A0A0J9YX44 114 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 A0A1B0GVT2 93 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 ARPC3O15145 178 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 CSF1P09603 554 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 CT62P0C5K7 136 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 RAB3AP20336 220 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 MGAT2Q10469 447 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 PRICKLE4Q2TBC4 344 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 LRRN1Q6UXK5 716 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 MAMSTRQ6ZN01 415 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 TMPRSS12Q86WS5 348 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 ZNF614Q8N883 585 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 RELL2Q8NC24 303 aaPredicted RBP12.49□□□□□ -0.41
PAX6-280ENST00000640872 LSM14AQ8ND56 463 aaKnown RBP12.49□□□□□ -0.41
PAX6-280ENST00000640872 PXT1Q8NFP0 134 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 OR4E2Q8NGC2 313 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 ASB13Q8WXK3 278 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 RSPH9Q9H1X1 276 aaPredicted RBP12.49□□□□□ -0.41
PAX6-280ENST00000640872 CERS4Q9HA82 394 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 MRPS23Q9Y3D9 190 aaKnown RBP12.49□□□□□ -0.41
PAX6-280ENST00000640872 EML5Q05BV3 1969 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 TP53BP1Q12888 1972 aaPredicted RBP12.49□□□□□ -0.41
PAX6-280ENST00000640872 MPTX1A8MV57 137 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 ABCD4O14678 606 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 PRAMEF2O60811 474 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 UPK3AO75631 287 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 CDC123O75794 336 aaPredicted RBP12.49□□□□□ -0.41
PAX6-280ENST00000640872 GLCEO94923 617 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 PAK4O96013 591 aaPredicted RBP12.49□□□□□ -0.41
PAX6-280ENST00000640872 RPL4P36578 427 aaKnown RBP12.49□□□□□ -0.41
PAX6-280ENST00000640872 SORDQ00796 357 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 KIRREL2Q6UWL6 708 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 TMEM52Q8NDY8 209 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 RASD2Q96D21 266 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 Q96M85 177 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 OR2A5Q96R48 311 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 DNTTIP1Q9H147 329 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 BARX1Q9HBU1 254 aaPredicted RBP12.49□□□□□ -0.41
PAX6-280ENST00000640872 APMAPQ9HDC9 416 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 TAS2R8Q9NYW2 309 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 SLC17A4Q9Y2C5 497 aa12.49□□□□□ -0.41
PAX6-280ENST00000640872 TRAV14DV4A0A0A6YYC5 116 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 ZNF860A6NHJ4 632 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 RFPL4AA6NLU0 287 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 RFPL4AL1F8VTS6 287 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 GNB5O14775 395 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 SCAMP1O15126 338 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 EIF4E2O60573 245 aaKnown RBP12.48□□□□□ -0.41
PAX6-280ENST00000640872 KDM4BO94953 1096 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 NKX2-2O95096 273 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 EGFP01133 1207 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 OR8G3PP0DMU2 310 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 EN2P19622 333 aaPredicted RBP12.48□□□□□ -0.41
PAX6-280ENST00000640872 SOX2P48431 317 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 SCAND1P57086 179 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 ALKBH1Q13686 389 aaKnown RBP12.48□□□□□ -0.41
PAX6-280ENST00000640872 ISXQ2M1V0 245 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 OR5AK2Q8NH90 309 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 STK35Q8TDR2 534 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 TNFAIP8L1Q8WVP5 186 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 PBX4Q9BYU1 374 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 MKKSQ9NPJ1 570 aaPredicted RBP12.48□□□□□ -0.41
PAX6-280ENST00000640872 FRRS1LQ9P0K9 344 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 MOKQ9UQ07 419 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 KLHDC2Q9Y2U9 406 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 COL4A2P08572 1712 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 TRAV8-7A0A075B6U6 113 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 FAM74A7A6NL05 159 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 SIGLEC5O15389 551 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 KCNJ13O60928 360 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 MTRF1O75570 445 aaKnown RBP12.48□□□□□ -0.41
PAX6-280ENST00000640872 RPP14O95059 124 aaKnown RBP12.48□□□□□ -0.41
PAX6-280ENST00000640872 CSF2RBP32927 897 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 SIGLEC14Q08ET2 396 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 GXYLT1Q4G148 440 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 FAM74A3Q4VXF1 159 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 ANKRD16Q6P6B7 361 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 ULK3Q6PHR2 472 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 KRT77Q7Z794 578 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 OR51S1Q8NGJ8 323 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 LCN9Q8WX39 176 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 ST8SIA2Q92186 375 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 HOXB13Q92826 284 aaPredicted RBP12.48□□□□□ -0.41
PAX6-280ENST00000640872 CCDC74AQ96AQ1 378 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 ALG12Q9BV10 488 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 RXFP3Q9NSD7 469 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 RASL12Q9NYN1 266 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 SERGEFQ9UGK8 458 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 MRM2Q9UI43 246 aaKnown RBP12.48□□□□□ -0.41
PAX6-280ENST00000640872 PRELID3BQ9Y3B1 194 aa12.48□□□□□ -0.41
PAX6-280ENST00000640872 KLF2Q9Y5W3 355 aaPredicted RBP12.48□□□□□ -0.41
PAX6-280ENST00000640872 TRBV5-7A0A0A0MS05 114 aa12.47□□□□□ -0.41
PAX6-280ENST00000640872 GGT3PA6NGU5 568 aa12.47□□□□□ -0.41
PAX6-280ENST00000640872 FAM171A2A8MVW0 826 aa12.47□□□□□ -0.41
PAX6-280ENST00000640872 CTSVO60911 334 aa12.47□□□□□ -0.41
PAX6-280ENST00000640872 ABHD16AO95870 558 aa12.47□□□□□ -0.41
PAX6-280ENST00000640872 CBX7O95931 251 aa12.47□□□□□ -0.41
PAX6-280ENST00000640872 UBBP0CG47 229 aa12.47□□□□□ -0.41
PAX6-280ENST00000640872 UBCP0CG48 685 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms