RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 MLKLQ8NB16 471 aa2.17□□□□□ -2.06
ATM-230ENST00000640388 ACBD4Q8NC06 268 aa2.17□□□□□ -2.06
ATM-230ENST00000640388 ZNF397Q8NF99 534 aaPredicted RBP2.17□□□□□ -2.06
ATM-230ENST00000640388 OR2L5Q8NG80 312 aa2.17□□□□□ -2.06
ATM-230ENST00000640388 FNDC8Q8TC99 324 aa2.17□□□□□ -2.06
ATM-230ENST00000640388 DNAJA3Q96EY1 480 aa2.17□□□□□ -2.06
ATM-230ENST00000640388 CATSPER2Q96P56 530 aa2.17□□□□□ -2.06
ATM-230ENST00000640388 KIR2DL4Q99706 377 aa2.17□□□□□ -2.06
ATM-230ENST00000640388 HCAR1Q9BXC0 346 aa2.17□□□□□ -2.06
ATM-230ENST00000640388 ALG9Q9H6U8 611 aa2.17□□□□□ -2.06
ATM-230ENST00000640388 POLD4Q9HCU8 107 aa2.17□□□□□ -2.06
ATM-230ENST00000640388 YAE1D1Q9NRH1 226 aa2.17□□□□□ -2.06
ATM-230ENST00000640388 C6orf203Q9P0P8 240 aaPredicted RBP2.17□□□□□ -2.06
ATM-230ENST00000640388 SLC2A6Q9UGQ3 507 aa2.17□□□□□ -2.06
ATM-230ENST00000640388 APOBEC3BQ9UH17 382 aaKnown RBP2.17□□□□□ -2.06
ATM-230ENST00000640388 HPCAL4Q9UM19 191 aa2.17□□□□□ -2.06
ATM-230ENST00000640388 SNX6Q9UNH7 406 aa2.17□□□□□ -2.06
ATM-230ENST00000640388 RABL2BQ9UNT1 228 aa2.17□□□□□ -2.06
ATM-230ENST00000640388 RNF6Q9Y252 685 aa2.17□□□□□ -2.06
ATM-230ENST00000640388 SF3B1O75533 1304 aaKnown RBP eCLIP2.17□□□□□ -2.06
ATM-230ENST00000640388 ABCB11O95342 1321 aa2.17□□□□□ -2.06
ATM-230ENST00000640388 WDR19Q8NEZ3 1342 aa2.17□□□□□ -2.06
ATM-230ENST00000640388 RNF213Q63HN8 5207 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 C15orf38-AP3S2A0A0A6YYH1 394 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 LCE6AA0A183 80 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 WASH3PC4AMC7 463 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.16□□□□□ -2.06
ATM-230ENST00000640388 K7EQS6 105 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 PDLIM1O00151 329 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 CLDN5O00501 218 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 RTL8CO15255 209 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 NOL4O94818 638 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 TOXO94900 526 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 SNX4O95219 450 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 SLC35G4P0C7Q5 338 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 PDHBP11177 359 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 CPN1P15169 458 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 PTGFRP43088 359 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 SGSHP51688 502 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 NAPAP54920 295 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 RIPK4P57078 832 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 NOP14P78316 857 aaKnown RBP2.16□□□□□ -2.06
ATM-230ENST00000640388 CSNK1G2P78368 415 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 CDC20Q12834 499 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 EIF2B1Q14232 305 aaKnown RBP2.16□□□□□ -2.06
ATM-230ENST00000640388 PDK4Q16654 411 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 CDKN3Q16667 212 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 DEFB109BQ30KR1 87 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 ZNF699Q32M78 642 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 GLYR1Q49A26 553 aaPredicted RBP2.16□□□□□ -2.06
ATM-230ENST00000640388 MARCH8Q5T0T0 291 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 LIPKQ5VXJ0 399 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 LEG1Q6P5S2 330 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 WASH2PQ6VEQ5 465 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 CENPUQ71F23 418 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 LHFPL4Q7Z7J7 247 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 GRAMD2AQ8IUY3 354 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 CCDC36Q8IYA8 594 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 GPR65Q8IYL9 337 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 MCOLN2Q8IZK6 566 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 ZCCHC7Q8N3Z6 543 aaKnown RBP2.16□□□□□ -2.06
ATM-230ENST00000640388 ALLCQ8N6M5 410 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 NFAM1Q8NET5 270 aaPredicted RBP2.16□□□□□ -2.06
ATM-230ENST00000640388 OR2T3Q8NH03 318 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 WDR36Q8NI36 951 aaKnown RBP2.16□□□□□ -2.06
ATM-230ENST00000640388 DLX4Q92988 240 aaPredicted RBP2.16□□□□□ -2.06
ATM-230ENST00000640388 MCHR2Q969V1 340 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 SENP8Q96LD8 212 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 VSTM2LQ96N03 204 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 VPS35Q96QK1 796 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 ZSCAN5AQ9BUG6 496 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 OPN3Q9H1Y3 402 aaPredicted RBP2.16□□□□□ -2.06
ATM-230ENST00000640388 GORASP2Q9H8Y8 452 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 LRRC40Q9H9A6 602 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 LPAR2Q9HBW0 351 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 PALMDQ9NP74 551 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 ZDHHC4Q9NPG8 344 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 AGPAT5Q9NUQ2 364 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 ASF1BQ9NVP2 202 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 TMEM9Q9P0T7 183 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 ATP6V1HQ9UI12 483 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 B9D1Q9UPM9 204 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 CA5BQ9Y2D0 317 aa2.16□□□□□ -2.06
ATM-230ENST00000640388 ZNF638Q14966 1978 aaKnown RBP2.16□□□□□ -2.06
ATM-230ENST00000640388 LRIT2A6NDA9 550 aa2.15□□□□□ -2.07
ATM-230ENST00000640388 FBLL1A6NHQ2 334 aaKnown RBP2.15□□□□□ -2.07
ATM-230ENST00000640388 CCDC169A6NNP5 214 aa2.15□□□□□ -2.07
ATM-230ENST00000640388 MKRN2OSH3BPM6 223 aa2.15□□□□□ -2.07
ATM-230ENST00000640388 M0QZ92 97 aa2.15□□□□□ -2.07
ATM-230ENST00000640388 UBXN8O00124 270 aa2.15□□□□□ -2.07
ATM-230ENST00000640388 XPO1O14980 1071 aaKnown RBP2.15□□□□□ -2.07
ATM-230ENST00000640388 CASC3O15234 703 aaKnown RBP2.15□□□□□ -2.07
ATM-230ENST00000640388 PIN1P1O15428 100 aa2.15□□□□□ -2.07
ATM-230ENST00000640388 KLF8O95600 359 aaPredicted RBP2.15□□□□□ -2.07
ATM-230ENST00000640388 IGSF6O95976 241 aa2.15□□□□□ -2.07
ATM-230ENST00000640388 NDUFB10O96000 172 aa2.15□□□□□ -2.07
ATM-230ENST00000640388 ACTL6AO96019 429 aa2.15□□□□□ -2.07
ATM-230ENST00000640388 HSPB1P04792 205 aaKnown RBP2.15□□□□□ -2.07
ATM-230ENST00000640388 H2AFZP0C0S5 128 aa2.15□□□□□ -2.07
ATM-230ENST00000640388 CCDC166P0CW27 439 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms