RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-238	ENST00000638514	SCN3A	Q9NY46	2000 aa		12.52	□□□□□ -0.4
KCNMA1-238	ENST00000638514		A0A1W2PR48	441 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	AKR7A3	O95154	331 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	IFNG	P01579	166 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	RD3L	P0DJH9	198 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514		Q3ZCU0	254 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	MANEA	Q5SRI9	462 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	TMEM215	Q68D42	235 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	OR6N1	Q8NGY5	312 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	SGK3	Q96BR1	496 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	CNN2	Q99439	309 aa	Known RBP	12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	WDR45	Q9Y484	360 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	ATG4B	Q9Y4P1	393 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	GATC	O43716	136 aa	Known RBP	12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	CTNS	O60931	367 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	GLS	O94925	669 aa	Predicted RBP	12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	AK4	P27144	223 aa	Predicted RBP	12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	NDUFS1	P28331	727 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	PTGFR	P43088	359 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	AKR1C2	P52895	323 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	PPIA	P62937	165 aa	Known RBP	12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	AKR1C1	Q04828	323 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	ZNF234	Q14588	700 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	TSC22D1	Q15714	1073 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	EIPR1	Q53HC9	387 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	ZNF547	Q8IVP9	402 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	SLC35F2	Q8IXU6	374 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	METTL27	Q8N6F8	245 aa	Predicted RBP	12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	DUSP19	Q8WTR2	217 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	ZNF471	Q9BX82	626 aa	Predicted RBP	12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	OR52A5	Q9H2C5	316 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	APMAP	Q9HDC9	416 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	EPHA6	Q9UF33	1036 aa		12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	MDC1	Q14676	2089 aa	Known RBP	12.52	□□□□□ -0.41
KCNMA1-238	ENST00000638514	CACNA1E	Q15878	2313 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	C17orf113	A0A1B0GUU1	675 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	TSPAN11	A1L157	253 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	OR14I1	A6ND48	311 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514		H7C417	338 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	CLEC3A	O75596	197 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	RNF224	P0DH78	156 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	ITPKB	P27987	946 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	MPI	P34949	423 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	OR1Q1	Q15612	314 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	DHRS7B	Q6IAN0	325 aa	Predicted RBP	12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	KCNRG	Q8N5I3	272 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	MRPL43	Q8N983	215 aa	Known RBP	12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	OR2L2	Q8NH16	312 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	MS4A4E	Q96PG1	132 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	AICDA	Q9GZX7	198 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	PCBD2	Q9H0N5	130 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	RSPH9	Q9H1X1	276 aa	Predicted RBP	12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	KLHL31	Q9H511	634 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	EXO5	Q9H790	373 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	MTFP1	Q9UDX5	166 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	GTF2A1L	Q9UNN4	478 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	OR10H1	Q9Y4A9	318 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	LRIT2	A6NDA9	550 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	AIFM1	O95831	613 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	CTSL	P07711	333 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	CSF1	P09603	554 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	GKN3P	P0CG01	181 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	MAGEB1	P43366	347 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	TMPRSS11F	Q6ZWK6	438 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	BEST3	Q8N1M1	668 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	OR14A16	Q8NHC5	309 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	DTD2	Q96FN9	168 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	ZNF75A	Q96N20	296 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	PDCD10	Q9BUL8	212 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	WDR13	Q9H1Z4	485 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	TAS2R8	Q9NYW2	309 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	MYEF2	Q9P2K5	600 aa	Known RBP	12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	PCDHB10	Q9UN67	800 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	ETV7	Q9Y603	341 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	TMEM200C	A6NKL6	621 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	HTR3B	O95264	441 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	PAPLN	O95428	1278 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	EN2	P19622	333 aa	Predicted RBP	12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	HTR2A	P28223	471 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	GAS6	Q14393	721 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	JMJD6	Q6NYC1	403 aa	Predicted RBP	12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	DBX2	Q6ZNG2	339 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	PGAP1	Q75T13	922 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	OR51L1	Q8NGJ5	315 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	OR1S2	Q8NGQ3	325 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	CDS1	Q92903	461 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	TSACC	Q96A04	125 aa	Predicted RBP	12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	ZNF514	Q96K75	400 aa	Predicted RBP	12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	LINC00615	Q96LM1	132 aa	Predicted RBP	12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	C14orf105	Q9NVL8	296 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	ZNF281	Q9Y2X9	895 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	MED31	Q9Y3C7	131 aa		12.51	□□□□□ -0.41
KCNMA1-238	ENST00000638514	DUXA	A6NLW8	204 aa		12.5	□□□□□ -0.41
KCNMA1-238	ENST00000638514	BCL2L11	O43521	198 aa		12.5	□□□□□ -0.41
KCNMA1-238	ENST00000638514	TMIGD3	P0DMS9	266 aa	Predicted RBP	12.5	□□□□□ -0.41
KCNMA1-238	ENST00000638514	ADRB3	P13945	408 aa		12.5	□□□□□ -0.41
KCNMA1-238	ENST00000638514	HSD17B2	P37059	387 aa		12.5	□□□□□ -0.41
KCNMA1-238	ENST00000638514	ARHGAP19	Q14CB8	494 aa		12.5	□□□□□ -0.41
KCNMA1-238	ENST00000638514	ZNF124	Q15973	351 aa		12.5	□□□□□ -0.41
KCNMA1-238	ENST00000638514	AVPI1	Q5T686	147 aa		12.5	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms