RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 PSKH1P11801 424 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 AHCYP23526 432 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 PITPNBP48739 271 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 NKX2-5P52952 324 aaPredicted RBP19.47■□□□□ 0.71
CLN6-224ENST00000638076 SF3A2Q15428 464 aaKnown RBP19.47■□□□□ 0.71
CLN6-224ENST00000638076 FAM69AQ5T7M9 428 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 PMS2CLQ68D20 193 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 ZNF57Q68EA5 555 aaPredicted RBP19.47■□□□□ 0.71
CLN6-224ENST00000638076 UNQ9370/PRO34162Q6UXP9 181 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 GLCCI1Q86VQ1 547 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 CDC20BQ86Y33 519 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 PM20D2Q8IYS1 436 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 NFAM1Q8NET5 270 aaPredicted RBP19.47■□□□□ 0.71
CLN6-224ENST00000638076 OR4D9Q8NGE8 314 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 NOX4Q9NPH5 578 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 PRDM6Q9NQX0 595 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 RARRES3Q9UL19 164 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 ZNF281Q9Y2X9 895 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 A0A0B4J203 849 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 A0A1W2PPC1 479 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 ZNF354AO60765 605 aaPredicted RBP19.47■□□□□ 0.71
CLN6-224ENST00000638076 FZD7O75084 574 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 NPIPB7O75200 414 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 ALOX12BO75342 701 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 ZFPL1O95159 310 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 PLGP00747 810 aaPredicted RBP19.47■□□□□ 0.71
CLN6-224ENST00000638076 HLA-BQ31612 363 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 SLC6A19Q695T7 634 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 OR5M10Q6IEU7 315 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 PLET1Q6UQ28 207 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 GRINAQ7Z429 371 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 FAM220AQ7Z4H9 259 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 HSD17B8Q92506 261 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 ORAI1Q96D31 301 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 HDHD2Q9H0R4 259 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 ZCCHC4Q9H5U6 513 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 MRM2Q9UI43 246 aaKnown RBP19.47■□□□□ 0.71
CLN6-224ENST00000638076 ZNF221Q9UK13 617 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 CLEC4AQ9UMR7 237 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 PCNX3Q9H6A9 2034 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 ADAM10O14672 748 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 ATP6V1G1O75348 118 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 TACSTD2P09758 323 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 SNRPBP14678 240 aaKnown RBP19.46■□□□□ 0.71
CLN6-224ENST00000638076 FBXW4P57775 412 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 SGCBQ16585 318 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 COL28A1Q2UY09 1125 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 EEF1A1P5Q5VTE0 462 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 OVCH1Q7RTY7 1134 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 KCTD20Q7Z5Y7 419 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 YIPF7Q8N8F6 280 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 METTL21AQ8WXB1 218 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 ZC3HAV1LQ96H79 300 aaKnown RBP19.46■□□□□ 0.71
CLN6-224ENST00000638076 WACQ9BTA9 647 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 WDR76Q9H967 626 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 LAMP5Q9UJQ1 280 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 PILRBQ9UKJ0 227 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 A8MVM7 634 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 ZNF879B4DU55 563 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 XKRYO14609 159 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 GPANK1O95872 356 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 KRT8P05787 483 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 RPS27P42677 84 aaKnown RBP19.46■□□□□ 0.71
CLN6-224ENST00000638076 SLC26A5P58743 744 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 DCDP81605 110 aaKnown RBP19.46■□□□□ 0.71
CLN6-224ENST00000638076 YIF1BQ5BJH7 314 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 C1orf140Q5VVS0 124 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 OR6N2Q8NGY6 317 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 CCDC74BQ96LY2 380 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 OR11A1Q9GZK7 315 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 BRD7Q9NPI1 651 aa19.46■□□□□ 0.71
CLN6-224ENST00000638076 A0A087WV48 116 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 A0A0B4J293 547 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 FAM240BA0A1B0GVZ2 78 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 C2orf72A6NCS6 295 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 ACOD1A6NK06 481 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 PIN1P1O15428 100 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 LANCL1O43813 399 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 UPK3AO75631 287 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 AKR7A3O95154 331 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 SRMP19623 302 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 MAGEB1P43366 347 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 ATAD3CQ5T2N8 411 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 LIPNQ5VXI9 398 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 DPY19L4Q7Z388 723 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 RGP1Q92546 391 aaPredicted RBP19.45■□□□□ 0.7
CLN6-224ENST00000638076 THAP7Q9BT49 309 aaPredicted RBP19.45■□□□□ 0.7
CLN6-224ENST00000638076 MFRPQ9BY79 579 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 ABRACLQ9P1F3 81 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 NLKQ9UBE8 527 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 FAM157BP0CG42 384 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 TFPIP10646 304 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 EFR3AQ14156 821 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 DUSP18Q8NEJ0 188 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 PHYHIPQ92561 330 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 RFT1Q96AA3 541 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 ABHD1Q96SE0 405 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.45■□□□□ 0.72e-6■■□□□ 13
CLN6-224ENST00000638076 TEKT2Q9UIF3 430 aa19.45■□□□□ 0.7
CLN6-224ENST00000638076 CCDC163A0A0D9SF12 145 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms