RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 LRFN5Q96NI6 719 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 CXorf56Q9H5V9 222 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 EVA1AQ9H8M9 152 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 NDUFA13Q9P0J0 144 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 WARS2Q9UGM6 360 aaKnown RBP11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 RSL24D1Q9UHA3 163 aaKnown RBP11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 NXT1Q9UKK6 140 aaKnown RBP11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 PCNX3Q9H6A9 2034 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 MPZL2O60487 215 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 PTP4A3O75365 173 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 KLF7O75840 302 aaPredicted RBP11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 MT-CO3P00414 261 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 LCKP06239 509 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 NR4A1P22736 598 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 PSMB9P28065 219 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 FOLR3P41439 243 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 PNLIPRP2P54317 469 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 ZSWIM7Q19AV6 140 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 PGGHGQ32M88 737 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 HES3Q5TGS1 186 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 FCRLBQ6BAA4 426 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 SMARCD3Q6STE5 483 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 TIPARPQ7Z3E1 657 aaKnown RBP11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 ZNF440Q8IYI8 595 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 CDK20Q8IZL9 346 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 PRSS33Q8NF86 280 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 DGCR14Q96DF8 476 aaKnown RBP11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 LRR1Q96L50 414 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 CCNB1IP1Q9NPC3 277 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 FOXJ2Q9P0K8 574 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 COMMD3-BMI1R4GMX3 469 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 SDK2Q58EX2 2172 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 CPAMD8Q8IZJ3 1885 aa11.44□□□□□ -0.58
CACNA1A-244ENST00000637625 CDC40O60508 579 aaKnown RBP eCLIP11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 OR2J2O76002 312 aa11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 NADKO95544 446 aaPredicted RBP11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 CDK1P06493 297 aa11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 SNRPGP62308 76 aaKnown RBP11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 ZNF91Q05481 1191 aa11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 ST3GAL4Q11206 333 aa11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 WBP2NLQ6ICG8 309 aa11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 PRSS48Q7RTY5 328 aa11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 IGFN1Q86VF2 1251 aa11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 MARCH9Q86YJ5 346 aa11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 RNF113BQ8IZP6 322 aaKnown RBP11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 C17orf47Q8NEP4 570 aa11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 OR52L1Q8NGH7 329 aa11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 OR8J1Q8NGP2 316 aa11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 OR13F1Q8NGS4 319 aa11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 WDR36Q8NI36 951 aaKnown RBP11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 CT55Q8WUE5 264 aa11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 OSTF1Q92882 214 aa11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 SLC35B4Q969S0 331 aa11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 OTULINQ96BN8 352 aa11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 ISOC1Q96CN7 298 aa11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 HS6ST2Q96MM7 605 aa11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 SLC38A2Q96QD8 506 aa11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 POLDIP3Q9BY77 421 aaKnown RBP11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 GALNT9Q9HCQ5 603 aa11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 PLCXD1Q9NUJ7 323 aa11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 TMEM5Q9Y2B1 443 aa11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 HS3ST3B1Q9Y662 390 aa11.43□□□□□ -0.58
CACNA1A-244ENST00000637625 IGHV1-45A0A0A0MS14 117 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 ZNF99A8MXY4 864 aaPredicted RBP11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 TMX2-CTNND1H3BSU7 103 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 FADS1O60427 444 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 ELANEP08246 267 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 COX6A1P12074 109 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 JUNBP17275 347 aaPredicted RBP11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 PAX7P23759 505 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 PPIFP30405 207 aaKnown RBP11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 OTX2P32243 289 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 CTBP2P56545 445 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 E2F1Q01094 437 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 NHLH2Q02577 135 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 CD300EQ496F6 205 aaPredicted RBP11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 SYT14P1Q58G82 188 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 KRT77Q7Z794 578 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 LRRC17Q8N6Y2 441 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 DEFB124Q8NES8 71 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 OR2T33Q8NG76 320 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 OR2Y1Q8NGV0 311 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 NUBPLQ8TB37 319 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 RORBQ92753 470 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 MYDGFQ969H8 173 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 PLEKHA8Q96JA3 519 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 ZNF582Q96NG8 517 aaPredicted RBP11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 SIGLEC11Q96RL6 698 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 ZNF426Q9BUY5 554 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 DEFB126Q9BYW3 111 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 LAT2Q9GZY6 243 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 HHATLQ9HCP6 504 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 ACOT13Q9NPJ3 140 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 EXOSC3Q9NQT5 275 aaKnown RBP11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 LIN7CQ9NUP9 197 aaKnown RBP11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 FKBP14Q9NWM8 211 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 IL20Q9NYY1 176 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 PPIEQ9UNP9 301 aaKnown RBP11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 IGKV1D-42A0A075B6H8 117 aa11.42□□□□□ -0.58
CACNA1A-244ENST00000637625 A0A087WUJ7 227 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms