RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 TMEM176BQ3YBM2 270 aaPredicted RBP13.78□□□□□ -0.2
CLN6-219ENST00000637329 MESTQ5EB52 335 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 UBE2UQ5VVX9 321 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 GTF2IRD2BQ6EKJ0 949 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 PAQR6Q6TCH4 344 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 GALNTL5Q7Z4T8 443 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 GPR141Q7Z602 305 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 PXKQ7Z7A4 578 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 GTF2IRD2Q86UP8 949 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 SLC22A16Q86VW1 577 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 ARIH2OSQ8N7S6 290 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 NPEPL1Q8NDH3 523 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 ATP6V1C2Q8NEY4 427 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 BBS1Q8NFJ9 593 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 OR4K13Q8NH42 304 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 ZNF519Q8TB69 540 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 FAR1Q8WVX9 515 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 KISS1RQ969F8 398 aaPredicted RBP13.78□□□□□ -0.2
CLN6-219ENST00000637329 RASD2Q96D21 266 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 LGALS12Q96DT0 336 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 CRELD1Q96HD1 420 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 Q96M85 177 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 SFXN2Q96NB2 322 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 HES7Q9BYE0 225 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 RACGAP1Q9H0H5 632 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 TMEM185BQ9H7F4 350 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 SEC14L4Q9UDX3 406 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 EXOGQ9Y2C4 368 aaKnown RBP13.78□□□□□ -0.2
CLN6-219ENST00000637329 NOX1Q9Y5S8 564 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 URB1O60287 2271 aaKnown RBP13.78□□□□□ -0.2
CLN6-219ENST00000637329 TRAV17A0A0B4J275 112 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 LOC102725191A0A1B0GVB3 256 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 CCDC182A6NF36 153 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 A6NIZ1 184 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 SULT2B1O00204 365 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 XKRYO14609 159 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 KALRNO60229 2985 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 MPDZO75970 2070 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 SEC14L2O76054 403 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 RENP00797 406 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 PRB1P04280 392 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 SHC1P29353 583 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 OR2B6P58173 313 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 RAP1BP61224 184 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 RAP1AP62834 184 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 PLGLB1Q02325 96 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 GGTLC2Q14390 218 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 RAB39AQ14964 217 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 ACKR1Q16570 336 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 LEG1Q6P5S2 330 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 IGFL3Q6UXB1 125 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 EML6Q6ZMW3 1958 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 ESPNLQ6ZVH7 1005 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 ZNF367Q7RTV3 350 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 POMGNT2Q8NAT1 580 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 OR52I1Q8NGK6 324 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 OR13F1Q8NGS4 319 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 RORBQ92753 470 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 ZHX1-C8orf76Q96EF9 292 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 DDOQ99489 341 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 HCAR1Q9BXC0 346 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 MFRPQ9BY79 579 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 MOKQ9UQ07 419 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 RASD1Q9Y272 281 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 EXOSC1Q9Y3B2 195 aaKnown RBP13.77□□□□□ -0.21
CLN6-219ENST00000637329 COMMD3-BMI1R4GMX3 469 aa13.77□□□□□ -0.21
CLN6-219ENST00000637329 PCNX3Q9H6A9 2034 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 A0A1W2PNR3 127 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 ZNF99A8MXY4 864 aaPredicted RBP13.76□□□□□ -0.21
CLN6-219ENST00000637329 NPIPA5E9PKD4 350 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 C11orf98E9PRG8 122 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 ATXN7O15265 892 aaPredicted RBP13.76□□□□□ -0.21
CLN6-219ENST00000637329 AHCYL1O43865 530 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 TRAPPC6AO75865 159 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 VAMP5O95183 116 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 IGHA1P01876 353 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 MYL12AP19105 171 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 POU3F2P20265 443 aaPredicted RBP13.76□□□□□ -0.21
CLN6-219ENST00000637329 AHCYP23526 432 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 C21orf33P30042 268 aaPredicted RBP13.76□□□□□ -0.21
CLN6-219ENST00000637329 P2RY4P51582 365 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 HSF1Q00613 529 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 SYT6Q5T7P8 510 aaPredicted RBP13.76□□□□□ -0.21
CLN6-219ENST00000637329 B3GNT6Q6ZMB0 384 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 YRDCQ86U90 279 aaKnown RBP13.76□□□□□ -0.21
CLN6-219ENST00000637329 SPACA3Q8IXA5 215 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 FAM109AQ8N4B1 249 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 TMEM251Q8N6I4 163 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 CYB561A3Q8NBI2 242 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 PTP4A1Q93096 173 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 OTULINQ96BN8 352 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 NMNAT3Q96T66 252 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 MND1Q9BWT6 205 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 RBM38Q9H0Z9 239 aaKnown RBP13.76□□□□□ -0.21
CLN6-219ENST00000637329 MED20Q9H944 212 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 ACKR4Q9NPB9 350 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 INPP5EQ9NRR6 644 aa13.76□□□□□ -0.21
CLN6-219ENST00000637329 VSX1Q9NZR4 365 aaPredicted RBP13.76□□□□□ -0.21
CLN6-219ENST00000637329 ZNF346Q9UL40 294 aaKnown RBP13.76□□□□□ -0.21
CLN6-219ENST00000637329 NPIPA1Q9UND3 350 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms