RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 CD226Q15762 336 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 TCEAL6Q6IPX3 200 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 KIRREL2Q6UWL6 708 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 APOOLQ6UXV4 268 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 COX15Q7KZN9 410 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 GPALPP1Q8IXQ4 340 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 TCEAL3Q969E4 200 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 HYLS1Q96M11 299 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 OR52D1Q9H346 318 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 TXNL4BQ9NX01 149 aaKnown RBP10.5□□□□□ -0.73
CLN6-217ENST00000636964 OCIAD1Q9NX40 245 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 ASH2LQ9UBL3 628 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 MGAT4AQ9UM21 535 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 MED31Q9Y3C7 131 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 RPL36Q9Y3U8 105 aaKnown RBP10.5□□□□□ -0.73
CLN6-217ENST00000636964 A0A0B4J2E0 115 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 C2orf92A0A1B0GVN3 265 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 A0A1B0GX12 115 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 LRRN3E7EW58 273 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 OIP5O43482 229 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 REM1O75628 298 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 SCRG1O75711 98 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 SOX30O94993 753 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 IGKV3-11P04433 115 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 FCER2P06734 321 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 ACAA1P09110 424 aaPredicted RBP10.5□□□□□ -0.73
CLN6-217ENST00000636964 FXYD6P3P58550 94 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 EFNB1P98172 346 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 EXOSC2Q13868 293 aaKnown RBP10.5□□□□□ -0.73
CLN6-217ENST00000636964 OCLNQ16625 522 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 TMEM201Q5SNT2 666 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 FAM69BQ5VUD6 431 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 LIPKQ5VXJ0 399 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 CBLN3Q6UW01 205 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 C16orf47Q6ZP98 133 aaPredicted RBP10.5□□□□□ -0.73
CLN6-217ENST00000636964 BBS1Q8NFJ9 593 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 TMEM163Q8TC26 289 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 PHOSPHO1Q8TCT1 267 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 DTD1Q8TEA8 209 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 OSTF1Q92882 214 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 MS4A3Q96HJ5 214 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 LINC00052Q96N35 136 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 SORCS2Q96PQ0 1159 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 SLC38A2Q96QD8 506 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 RBP7Q96R05 134 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 KLHDC3Q9BQ90 382 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 AKIRIN1Q9H9L7 192 aaPredicted RBP10.5□□□□□ -0.73
CLN6-217ENST00000636964 NDUFB11Q9NX14 153 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 CNOT2Q9NZN8 540 aaKnown RBP10.5□□□□□ -0.73
CLN6-217ENST00000636964 CDH10Q9Y6N8 788 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 A0A0A6YYJ9 748 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 GPR171O14626 319 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 TPOP07202 933 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 PNLIPP16233 465 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 PPICP45877 212 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 LCN1P1Q5VSP4 162 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 RHBDD2Q6NTF9 364 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 C9orf40Q8IXQ3 194 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 OR4D9Q8NGE8 314 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 NANPQ8TBE9 248 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 THAP3Q8WTV1 239 aaPredicted RBP10.5□□□□□ -0.73
CLN6-217ENST00000636964 TMEM203Q969S6 136 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 SLC46A1Q96NT5 459 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 KCNJ15Q99712 375 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 UBQLN3Q9H347 655 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 RERGLQ9H628 205 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 HPF1Q9NWY4 346 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 RPS6KB2Q9UBS0 482 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 STUB1Q9UNE7 303 aa10.5□□□□□ -0.73
CLN6-217ENST00000636964 LYRM1O43325 122 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 FMO6PO60774 539 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 SYPP08247 313 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 SSTR2P30874 369 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 NKAIN1Q4KMZ8 207 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 C22orf42Q6IC83 251 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 ZNF613Q6PF04 617 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 THSD4Q6ZMP0 1018 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 TRILQ7L0X0 811 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 CDK20Q8IZL9 346 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 C9orf43Q8TAL5 461 aaPredicted RBP10.49□□□□□ -0.73
CLN6-217ENST00000636964 FGF11Q92914 225 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 ADIPOR1Q96A54 375 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 LCORQ96JN0 433 aaPredicted RBP10.49□□□□□ -0.73
CLN6-217ENST00000636964 RTN4RQ9BZR6 473 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 RACGAP1Q9H0H5 632 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 MKKSQ9NPJ1 570 aaPredicted RBP10.49□□□□□ -0.73
CLN6-217ENST00000636964 GSN-AS1Q9NRJ2 163 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 VSX1Q9NZR4 365 aaPredicted RBP10.49□□□□□ -0.73
CLN6-217ENST00000636964 RARRES3Q9UL19 164 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 UTS2O95399 124 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 RRASP10301 218 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 CLUP10909 449 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 SDC2P34741 201 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 CRYZQ08257 329 aaKnown RBP10.49□□□□□ -0.73
CLN6-217ENST00000636964 BIKQ13323 160 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 PGGHGQ32M88 737 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 KLHL26Q53HC5 615 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 HLA-DQA1Q5Y7H0 255 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 LCN10Q6JVE6 187 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 DPPA2Q7Z7J5 298 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms