RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 PSMB10P40306 273 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 OR10A3P58181 314 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 SFT2D3Q587I9 215 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ENTPD8Q5MY95 495 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 LMNTD1Q8N9Z9 388 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ABHD4Q8TB40 342 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 FAM213BQ8TBF2 198 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 IFI44Q8TCB0 444 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 DUSP19Q8WTR2 217 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 SLC38A5Q8WUX1 472 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 DEDD2Q8WXF8 326 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF775Q96BV0 537 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 SLC35A4Q96G79 324 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 SEMA4CQ9C0C4 833 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 RPS10-NUDT3A0A1W2PQS6 291 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 OR52A4PA6NMU1 304 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 M0R3H8 397 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 SOCS6O14544 535 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF207O43670 478 aaKnown RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 SLC10A3P09131 477 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 CPMP14384 443 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 CPEP16870 476 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 PROZP22891 400 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 GJA4P35212 333 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 RFC3P40938 356 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 RPS10P46783 165 aaKnown RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 UQCRFS1P47985 274 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 RAB38P57729 211 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 SLC7A9P82251 487 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 EXOSC7Q15024 291 aaKnown RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 RGNQ15493 299 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 NPY5RQ15761 445 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 CNIH2Q6PI25 160 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF705AQ6ZN79 300 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 RFPL4BQ6ZWI9 263 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 SVBPQ8N300 66 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 FRMD1Q8N878 549 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 SIMC1Q8NDZ2 872 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 OR7D2Q96RA2 312 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 THAP7Q9BT49 309 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 BCO1Q9HAY6 547 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 C5AR2Q9P296 337 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ONECUT1Q9UBC0 465 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 NLKQ9UBE8 527 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 TCFL5Q9UL49 500 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 MOKQ9UQ07 419 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 KLF13Q9Y2Y9 288 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 CEPT1Q9Y6K0 416 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 EFSO43281 561 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 SNAI1O95863 264 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 HIST1H1TP22492 207 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 TACR1P25103 407 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 EVI2BP34910 448 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ACSM1Q08AH1 577 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 SLC9A3R2Q15599 337 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 IER5LQ5T953 404 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 TMEM207Q6UWW9 146 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 BPIFB2Q8N4F0 458 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 C3orf58Q8NDZ4 430 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ASB11Q8WXH4 323 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 NSUN5Q96P11 429 aaKnown RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ARPC5LQ9BPX5 153 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF576Q9H609 170 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF395Q9H8N7 513 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 NMNAT1Q9HAN9 279 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 DMAC2Q9NW81 257 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 CD300AQ9UGN4 299 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 BTNL2Q9UIR0 455 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 PLIN4Q96Q06 1357 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 TRAV27A0A087WT01 109 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 ATP6V1G2-DDX39BF2Z307 99 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 GPR75O95800 540 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 F10P00742 488 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 CYC1P08574 325 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 EMP3P54852 163 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 CDKN2DP55273 166 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 YOD1Q5VVQ6 348 aaPredicted RBP5.15□□□□□ -1.58
SCN1A-209ENST00000635750 BLOC1S3Q6QNY0 202 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.15□□□□□ -1.582e-6■■□□□ 12
SCN1A-209ENST00000635750 TCEAL8Q8IYN2 117 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 OR13C9Q8NGT0 318 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 OR2T35Q8NGX2 323 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 KCNG3Q8TAE7 436 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 SARAFQ96BY9 339 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 SLC46A1Q96NT5 459 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 FCRL3Q96P31 734 aaPredicted RBP5.15□□□□□ -1.58
SCN1A-209ENST00000635750 C20orf85Q9H1P6 137 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 GAR1Q9NY12 217 aaKnown RBP5.15□□□□□ -1.58
SCN1A-209ENST00000635750 SPATA31D1Q6ZQQ2 1576 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 PRAMEF25A6NGN4 478 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 CRXO43186 299 aaPredicted RBP5.15□□□□□ -1.58
SCN1A-209ENST00000635750 LYRM1O43325 122 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 MRPS14O60783 128 aaKnown RBP5.15□□□□□ -1.58
SCN1A-209ENST00000635750 LCN6P62502 163 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 MGAT3Q09327 533 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 RAB40BQ12829 278 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 PROX2Q3B8N5 592 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 PRAMEF5Q5TYX0 476 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 PRAMEF6Q5VXH4 476 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 OR7E24Q6IFN5 339 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms