RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 SHFQ7M4L6 423 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 ANKRD37Q7Z713 158 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 ZNF295-AS1Q8N0V1 137 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 CISD2Q8N5K1 135 aaKnown RBP6.51□□□□□ -1.37
BRCA1-230ENST00000634433 ZNF441Q8N8Z8 693 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 GATSQ8NAP1 163 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 POMGNT2Q8NAT1 580 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 ZNF485Q8NCK3 441 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 OR5L2Q8NGL0 311 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 OR5W2Q8NH69 310 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 IFI44Q8TCB0 444 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 SPRYD4Q8WW59 207 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-230ENST00000634433 AP3S1Q92572 193 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 GFM1Q96RP9 751 aaKnown RBP6.51□□□□□ -1.37
BRCA1-230ENST00000634433 LMF1Q96S06 567 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 GPX7Q96SL4 187 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-230ENST00000634433 SEMA4CQ9C0C4 833 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 RNF167Q9H6Y7 350 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 MED20Q9H944 212 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 NANSQ9NR45 359 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 CTSFQ9UBX1 484 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 CHRNA9Q9UGM1 479 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 NOX1Q9Y5S8 564 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 IER3IP1Q9Y5U9 82 aa6.51□□□□□ -1.37
BRCA1-230ENST00000634433 ASXL3Q9C0F0 2248 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 CACNA1BQ00975 2339 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 CCDC182A6NF36 153 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 OR6C70A6NIJ9 312 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 ACOD1A6NK06 481 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 WWP2O00308 870 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 GNB5O14775 395 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 HCRTR2O43614 444 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 CDC40O60508 579 aaKnown RBP eCLIP6.5□□□□□ -1.37
BRCA1-230ENST00000634433 ATP6V1G1O75348 118 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 CDRT1O95170 752 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 SBK2P0C263 348 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 OCM2P0CE71 109 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 OCMP0CE72 109 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-230ENST00000634433 ITPKBP27987 946 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 RPS19P39019 145 aaKnown RBP6.5□□□□□ -1.37
BRCA1-230ENST00000634433 WNT5AP41221 380 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 ARPC4P59998 168 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 RNF4P78317 190 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 FHL1Q13642 323 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 IL10RAQ13651 578 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 PON3Q15166 354 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 TRIM16LQ309B1 348 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 CD200R1LQ6Q8B3 271 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 DCDC5Q6ZRR9 648 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 TMPRSS9Q7Z410 1059 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-230ENST00000634433 PRR22Q8IZ63 422 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 ATP6V1C2Q8NEY4 427 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 OR10H4Q8NGA5 316 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 OR52E2Q8NGJ4 325 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 NUBPLQ8TB37 319 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 TM9SF4Q92544 642 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 SLC25A46Q96AG3 418 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 ALG8Q9BVK2 526 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 TRIM36Q9NQ86 728 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 SLC22A11Q9NSA0 550 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 FAIMQ9NVQ4 179 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 TOR4AQ9NXH8 423 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 PPIEQ9UNP9 301 aaKnown RBP6.5□□□□□ -1.37
BRCA1-230ENST00000634433 SF3B6Q9Y3B4 125 aaKnown RBP6.5□□□□□ -1.37
BRCA1-230ENST00000634433 UGT2A1Q9Y4X1 527 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 NUP210LQ5VU65 1888 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 KMT2BQ9UMN6 2715 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-230ENST00000634433 PTPRZ1P23471 2315 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-230ENST00000634433 VSTM2BA6NLU5 285 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 IDSB3KWA1 339 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 AGRPO00253 132 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 GPRIN2O60269 458 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 SLC25A12O75746 678 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 AKR7A3O95154 331 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 PDGFBP01127 241 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-230ENST00000634433 OR2T7P0C7T2 308 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 TMIGD3P0DMS9 266 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-230ENST00000634433 NAGAP17050 411 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 CELP19835 753 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 SLC2A5P22732 501 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 P2RX1P51575 399 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 RPS4XP62701 263 aaKnown RBP6.5□□□□□ -1.37
BRCA1-230ENST00000634433 RPS25P62851 125 aaKnown RBP6.5□□□□□ -1.37
BRCA1-230ENST00000634433 ZNF74Q16587 644 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 RSPO4Q2I0M5 234 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-230ENST00000634433 EMC4Q5J8M3 183 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 PHF19Q5T6S3 580 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 PWWP2BQ6NUJ5 590 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 C5orf46Q6UWT4 87 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 APOOLQ6UXV4 268 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 CENPSQ8N2Z9 138 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 SIRT6Q8N6T7 355 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 OR2T27Q8NH04 317 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 OR8K3Q8NH51 312 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 SMPDL3BQ92485 455 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 TMCO6Q96DC7 493 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 ZNF649Q9BS31 505 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 SLC26A1Q9H2B4 701 aa6.5□□□□□ -1.37
BRCA1-230ENST00000634433 KCNN2Q9H2S1 579 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms