RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 OR10A4Q9H209 315 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 NDUFB11Q9NX14 153 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 CGGBP1Q9UFW8 167 aaPredicted RBP6.83□□□□□ -1.32
PKP4-217ENST00000628904 PCDHGB1Q9Y5G3 927 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 BOD1L1Q8NFC6 3051 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 TMEM221A6NGB7 291 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 TEX46H3BTG2 121 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 TRIM3O75382 744 aaPredicted RBP6.83□□□□□ -1.32
PKP4-217ENST00000628904 GATBO75879 557 aaKnown RBP6.83□□□□□ -1.32
PKP4-217ENST00000628904 SULT1C4O75897 302 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 WDPCPO95876 746 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 TFP02787 698 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 POU2F2P09086 479 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 TCN2P20062 427 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 GIFP27352 417 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 FXYD6P3P58550 94 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 DCDP81605 110 aaKnown RBP6.83□□□□□ -1.32
PKP4-217ENST00000628904 MGAT2Q10469 447 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 EIF2B1Q14232 305 aaKnown RBP6.83□□□□□ -1.32
PKP4-217ENST00000628904 OXA1LQ15070 435 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 NKPD1Q17RQ9 610 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 LRRC37A5PQ49AS3 106 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 B3GNTL1Q67FW5 361 aaPredicted RBP6.83□□□□□ -1.32
PKP4-217ENST00000628904 SLC25A25Q6KCM7 469 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 TUBA3EQ6PEY2 450 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 C9orf40Q8IXQ3 194 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 IL22RA1Q8N6P7 574 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 TOR1AIP2Q8NFQ8 470 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 DVL3Q92997 716 aaPredicted RBP6.83□□□□□ -1.32
PKP4-217ENST00000628904 FRMD6Q96NE9 622 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 ZNF160Q9HCG1 818 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 EMC7Q9NPA0 242 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 AKAP7Q9P0M2 348 aaPredicted RBP6.83□□□□□ -1.32
PKP4-217ENST00000628904 MUC6Q6W4X9 2439 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 PLXNB3Q9ULL4 1909 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 ZNF726A6NNF4 738 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 H0YC42 278 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 EIF4EP06730 217 aaKnown RBP6.83□□□□□ -1.32
PKP4-217ENST00000628904 THBS1P07996 1170 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 MNDAP41218 407 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 MAP2K3P46734 347 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 FASLGP48023 281 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 UBE2MP61081 183 aaKnown RBP6.83□□□□□ -1.32
PKP4-217ENST00000628904 PSPHP78330 225 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 SFXN4Q6P4A7 337 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 ZNF613Q6PF04 617 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 ZNF101Q8IZC7 436 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 ACBD4Q8NC06 268 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 OR5AK2Q8NH90 309 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 SLC25A46Q96AG3 418 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 TXNDC15Q96J42 360 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 NEURL2Q9BR09 285 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 FBXL3Q9UKT7 428 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 EMC9Q9Y3B6 208 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 TICRRQ7Z2Z1 1910 aa6.83□□□□□ -1.32
PKP4-217ENST00000628904 A0A087WV62 115 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 MEIOCA2RUB1 952 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 VSTM2BA6NLU5 285 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 INMT-MINDY4F8WBC2 141 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 MSL3P1P0C860 447 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 SMIM10L1P0DMW3 83 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 BIDP55957 195 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 SLC37A1P57057 533 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 RNF4P78317 190 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 NR0B2Q15466 257 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 ELAVL1Q15717 326 aaKnown RBP6.82□□□□□ -1.32
PKP4-217ENST00000628904 HEPHL1Q6MZM0 1159 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 VASH1Q7L8A9 365 aaPredicted RBP6.82□□□□□ -1.32
PKP4-217ENST00000628904 MAMDC2Q7Z304 686 aaPredicted RBP6.82□□□□□ -1.32
PKP4-217ENST00000628904 YRDCQ86U90 279 aaKnown RBP6.82□□□□□ -1.32
PKP4-217ENST00000628904 SLC7A6Q92536 515 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 SMIM10Q96HG1 83 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 WWTR1Q9GZV5 400 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 NEK6Q9HC98 313 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 SDHAF3Q9NRP4 125 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 PLSCR3Q9NRY6 295 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 SLC39A1Q9NY26 324 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 KLHL9Q9P2J3 617 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 HSPB11Q9Y547 144 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 A0A1W2PQM1 296 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 TBX19O60806 448 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 CD14P08571 375 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 STARP49675 285 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 C19orf57Q0VDD7 668 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 ATXN7L3Q14CW9 347 aaPredicted RBP6.82□□□□□ -1.32
PKP4-217ENST00000628904 NTRK2Q16620 822 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 TATDN3Q17R31 274 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 LCN10Q6JVE6 187 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 NDUFAF7Q7L592 441 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 OR6V1Q8N148 313 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 OR51D1Q8NGF3 324 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 OR2T4Q8NH00 348 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 PELI1Q96FA3 418 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 SCARF2Q96GP6 870 aaPredicted RBP6.82□□□□□ -1.32
PKP4-217ENST00000628904 SLC46A1Q96NT5 459 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 THAP7Q9BT49 309 aaPredicted RBP6.82□□□□□ -1.32
PKP4-217ENST00000628904 PRRG4Q9BZD6 226 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 AUNIPQ9H7T9 357 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 PRR14LQ5THK1 2151 aa6.82□□□□□ -1.32
PKP4-217ENST00000628904 GBF1Q92538 1859 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms