RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 ZNF649Q9BS31 505 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 MRPS18AQ9NVS2 196 aaKnown RBP11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 TP53TG5Q9Y2B4 290 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 ALPK2Q86TB3 2170 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 CDHR4A6H8M9 788 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 FBXO45P0C2W1 286 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 WNT4P56705 351 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 EEF1A1P68104 462 aaKnown RBP11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 PGGHGQ32M88 737 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 SLC35F1Q5T1Q4 408 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 EEF1A1P5Q5VTE0 462 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 CARD17Q5XLA6 110 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 SLC6A19Q695T7 634 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 SNX33Q8WV41 574 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 SPTBN1Q01082 2364 aaKnown RBP11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 PRRG2O14669 202 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 KLF4O43474 513 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 FMO6PO60774 539 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 IGKV1D-16P01601 117 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 IMPDH2P12268 514 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 STARP49675 285 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 CSNK2A1P68400 391 aaPredicted RBP11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 FGFBP1Q14512 234 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 CD226Q15762 336 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 FHL5Q5TD97 284 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 MZT2BQ6NZ67 158 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 OR5M9Q8NGP3 310 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 SIAEQ9HAT2 523 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 MED13Q9UHV7 2174 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 VPS13AQ96RL7 3174 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 A0A087WUU8 490 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 TRGV5A0A0B4J1U4 118 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 A0A1W2PNR3 127 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 A0A1W2PRG6 482 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 MT-ND5P03915 603 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 SFTPCP11686 197 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 FUT1P19526 365 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 SLC1A3P43003 542 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 GBX2P52951 348 aaPredicted RBP11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 MLLT11Q13015 90 aaPredicted RBP11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 SF3B4Q15427 424 aaKnown RBP eCLIP11.28□□□□□ -0.62e-6■■■■□ 20.7
SYNGAP1-207ENST00000628646 HEPHL1Q6MZM0 1159 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 ZNF100Q8IYN0 542 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 C17orf47Q8NEP4 570 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 DACT3Q96B18 629 aaPredicted RBP11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 PHF21AQ96BD5 680 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 SARAFQ96BY9 339 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 SAMD8Q96LT4 415 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 OR11A1Q9GZK7 315 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 NDUFB11Q9NX14 153 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 CAB39Q9Y376 341 aaPredicted RBP11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 ZNF43P17038 809 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 FOXF1Q12946 379 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 INPP5JQ15735 1006 aaPredicted RBP11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 SULF2Q8IWU5 870 aa11.28□□□□□ -0.6
SYNGAP1-207ENST00000628646 TRGV8A0A0C4DH27 118 aa11.27□□□□□ -0.6
SYNGAP1-207ENST00000628646 HOXC12P31275 282 aa11.27□□□□□ -0.6
SYNGAP1-207ENST00000628646 RPS19P39019 145 aaKnown RBP11.27□□□□□ -0.6
SYNGAP1-207ENST00000628646 CARD18P57730 90 aa11.27□□□□□ -0.6
SYNGAP1-207ENST00000628646 NTRK2Q16620 822 aa11.27□□□□□ -0.6
SYNGAP1-207ENST00000628646 ZNF468Q5VIY5 522 aaPredicted RBP11.27□□□□□ -0.6
SYNGAP1-207ENST00000628646 GDF7Q7Z4P5 450 aa11.27□□□□□ -0.6
SYNGAP1-207ENST00000628646 OR10H5Q8NGA6 315 aa11.27□□□□□ -0.6
SYNGAP1-207ENST00000628646 OR52I1Q8NGK6 324 aa11.27□□□□□ -0.6
SYNGAP1-207ENST00000628646 SECISBP2Q96T21 854 aaKnown RBP11.27□□□□□ -0.6
SYNGAP1-207ENST00000628646 SLC6A15Q9H2J7 730 aa11.27□□□□□ -0.6
SYNGAP1-207ENST00000628646 CHRNA9Q9UGM1 479 aa11.27□□□□□ -0.6
SYNGAP1-207ENST00000628646 KLHL21Q9UJP4 597 aa11.27□□□□□ -0.6
SYNGAP1-207ENST00000628646 SF3B6Q9Y3B4 125 aaKnown RBP11.27□□□□□ -0.6
SYNGAP1-207ENST00000628646 RENP00797 406 aa11.27□□□□□ -0.61
SYNGAP1-207ENST00000628646 MAGEA5P43359 124 aa11.27□□□□□ -0.61
SYNGAP1-207ENST00000628646 OMPP47874 163 aa11.27□□□□□ -0.61
SYNGAP1-207ENST00000628646 DSCR4P56555 118 aaPredicted RBP11.27□□□□□ -0.61
SYNGAP1-207ENST00000628646 ZNF181Q2M3W8 571 aa11.27□□□□□ -0.61
SYNGAP1-207ENST00000628646 HBMQ6B0K9 141 aa11.27□□□□□ -0.61
SYNGAP1-207ENST00000628646 ARHGEF39Q8N4T4 335 aa11.27□□□□□ -0.61
SYNGAP1-207ENST00000628646 MOSPD2Q8NHP6 518 aa11.27□□□□□ -0.61
SYNGAP1-207ENST00000628646 BPIFA2Q96DR5 249 aa11.27□□□□□ -0.61
SYNGAP1-207ENST00000628646 DIRAS2Q96HU8 199 aa11.27□□□□□ -0.61
SYNGAP1-207ENST00000628646 ZNF582Q96NG8 517 aaPredicted RBP11.27□□□□□ -0.61
SYNGAP1-207ENST00000628646 SP140LQ9H930 580 aa11.27□□□□□ -0.61
SYNGAP1-207ENST00000628646 DIMT1Q9UNQ2 313 aaKnown RBP11.27□□□□□ -0.61
SYNGAP1-207ENST00000628646 ZNF292O60281 2723 aa11.27□□□□□ -0.61
SYNGAP1-207ENST00000628646 CENPXA8MT69 81 aa11.27□□□□□ -0.61
SYNGAP1-207ENST00000628646 ETV1P50549 477 aa11.27□□□□□ -0.61
SYNGAP1-207ENST00000628646 SCN1BQ07699 218 aa11.27□□□□□ -0.61
SYNGAP1-207ENST00000628646 MFSD13AQ14CX5 517 aa11.27□□□□□ -0.61
SYNGAP1-207ENST00000628646 C3orf33Q6P1S2 294 aa11.27□□□□□ -0.61
SYNGAP1-207ENST00000628646 ARSKQ6UWY0 536 aa11.27□□□□□ -0.61
SYNGAP1-207ENST00000628646 OR2M7Q8NG81 312 aa11.27□□□□□ -0.61
SYNGAP1-207ENST00000628646 SEC61A2Q9H9S3 476 aa11.27□□□□□ -0.61
SYNGAP1-207ENST00000628646 GRHPRQ9UBQ7 328 aa11.27□□□□□ -0.61
SYNGAP1-207ENST00000628646 UPB1Q9UBR1 384 aa11.27□□□□□ -0.61
SYNGAP1-207ENST00000628646 TRIM3O75382 744 aaPredicted RBP11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 NDUFB2O95178 105 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 LY6DQ14210 128 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 GLYR1Q49A26 553 aaPredicted RBP11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 FAM131AQ6UXB0 335 aa11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 ZBTB8BQ8NAP8 495 aaPredicted RBP11.26□□□□□ -0.61
SYNGAP1-207ENST00000628646 ITPKCQ96DU7 683 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms