RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 ALPK1Q96QP1 1244 aa17.91■□□□□ 0.46
PTCD3-220ENST00000627371 OR2M2Q96R28 347 aa17.91■□□□□ 0.46
PTCD3-220ENST00000627371 LINC00470Q9BZP3 86 aa17.91■□□□□ 0.46
PTCD3-220ENST00000627371 ACTR6Q9GZN1 396 aa17.91■□□□□ 0.46
PTCD3-220ENST00000627371 MED29Q9NX70 200 aa17.91■□□□□ 0.46
PTCD3-220ENST00000627371 LYVE1Q9Y5Y7 322 aa17.91■□□□□ 0.46
PTCD3-220ENST00000627371 PRR14LQ5THK1 2151 aa17.9■□□□□ 0.46
PTCD3-220ENST00000627371 CDC42EP2O14613 210 aa17.9■□□□□ 0.46
PTCD3-220ENST00000627371 SLC43A1O75387 559 aa17.9■□□□□ 0.46
PTCD3-220ENST00000627371 LYZL6O75951 148 aa17.9■□□□□ 0.46
PTCD3-220ENST00000627371 IFNGR1P15260 489 aa17.9■□□□□ 0.46
PTCD3-220ENST00000627371 PPP3CBP16298 524 aa17.9■□□□□ 0.46
PTCD3-220ENST00000627371 IL32P24001 234 aa17.9■□□□□ 0.46
PTCD3-220ENST00000627371 LIMS1P48059 325 aa17.9■□□□□ 0.46
PTCD3-220ENST00000627371 HMGA2P52926 109 aa17.9■□□□□ 0.46
PTCD3-220ENST00000627371 ANKDD1AQ495B1 522 aa17.9■□□□□ 0.46
PTCD3-220ENST00000627371 OR2T5Q6IEZ7 315 aa17.9■□□□□ 0.46
PTCD3-220ENST00000627371 OAFQ86UD1 273 aa17.9■□□□□ 0.46
PTCD3-220ENST00000627371 TMEM123Q8N131 208 aa17.9■□□□□ 0.46
PTCD3-220ENST00000627371 STEAP2Q8NFT2 490 aa17.9■□□□□ 0.46
PTCD3-220ENST00000627371 OR13C2Q8NGS9 318 aa17.9■□□□□ 0.46
PTCD3-220ENST00000627371 OR2T29Q8NH02 315 aa17.9■□□□□ 0.46
PTCD3-220ENST00000627371 TXNDC15Q96J42 360 aa17.9■□□□□ 0.46
PTCD3-220ENST00000627371 CHID1Q9BWS9 393 aa17.9■□□□□ 0.46
PTCD3-220ENST00000627371 TAS2R16Q9NYV7 291 aa17.9■□□□□ 0.46
PTCD3-220ENST00000627371 TMCC3Q9ULS5 477 aa17.9■□□□□ 0.46
PTCD3-220ENST00000627371 SETXQ7Z333 2677 aaKnown RBP17.9■□□□□ 0.46
PTCD3-220ENST00000627371 CACNA1DQ01668 2161 aa17.9■□□□□ 0.46
PTCD3-220ENST00000627371 TRAV27A0A087WT01 109 aa17.89■□□□□ 0.45
PTCD3-220ENST00000627371 SLC35F4A4IF30 521 aa17.89■□□□□ 0.45
PTCD3-220ENST00000627371 TNFRSF11BO00300 401 aa17.89■□□□□ 0.45
PTCD3-220ENST00000627371 F13BP05160 661 aa17.89■□□□□ 0.45
PTCD3-220ENST00000627371 ITGA5P08648 1049 aa17.89■□□□□ 0.45
PTCD3-220ENST00000627371 EPXP11678 715 aa17.89■□□□□ 0.45
PTCD3-220ENST00000627371 DNAJA1P31689 397 aaKnown RBP17.89■□□□□ 0.45
PTCD3-220ENST00000627371 FHL1Q13642 323 aa17.89■□□□□ 0.45
PTCD3-220ENST00000627371 TSC22D1Q15714 1073 aa17.89■□□□□ 0.45
PTCD3-220ENST00000627371 C1orf146Q5VVC0 180 aa17.89■□□□□ 0.45
PTCD3-220ENST00000627371 SLC35D2Q76EJ3 337 aa17.89■□□□□ 0.45
PTCD3-220ENST00000627371 BHLHA15Q7RTS1 189 aaPredicted RBP17.89■□□□□ 0.45
PTCD3-220ENST00000627371 ABHD12BQ7Z5M8 362 aaPredicted RBP17.89■□□□□ 0.45
PTCD3-220ENST00000627371 ZNF295-AS1Q8N0V1 137 aa17.89■□□□□ 0.45
PTCD3-220ENST00000627371 ZNF433Q8N7K0 673 aaPredicted RBP17.89■□□□□ 0.45
PTCD3-220ENST00000627371 MOSPD2Q8NHP6 518 aa17.89■□□□□ 0.45
PTCD3-220ENST00000627371 C14orf79Q96F83 325 aa17.89■□□□□ 0.45
PTCD3-220ENST00000627371 ADAD1Q96M93 576 aaKnown RBP17.89■□□□□ 0.45
PTCD3-220ENST00000627371 WFIKKN1Q96NZ8 548 aa17.89■□□□□ 0.45
PTCD3-220ENST00000627371 ALKBH3Q96Q83 286 aaPredicted RBP17.89■□□□□ 0.45
PTCD3-220ENST00000627371 USB1Q9BQ65 265 aaKnown RBP17.89■□□□□ 0.45
PTCD3-220ENST00000627371 MED18Q9BUE0 208 aa17.89■□□□□ 0.45
PTCD3-220ENST00000627371 EMC6Q9BV81 110 aa17.89■□□□□ 0.45
PTCD3-220ENST00000627371 INIPQ9NRY2 104 aa17.89■□□□□ 0.45
PTCD3-220ENST00000627371 A0A1W2PRG6 482 aa17.88■□□□□ 0.45
PTCD3-220ENST00000627371 NPIPB13A6NJU9 1138 aa17.88■□□□□ 0.45
PTCD3-220ENST00000627371 NPIPB4C9JG80 1138 aa17.88■□□□□ 0.45
PTCD3-220ENST00000627371 CLOCKO15516 846 aa17.88■□□□□ 0.45
PTCD3-220ENST00000627371 KLF4O43474 513 aa17.88■□□□□ 0.45
PTCD3-220ENST00000627371 UPK3AO75631 287 aa17.88■□□□□ 0.45
PTCD3-220ENST00000627371 KRT33AO76009 404 aa17.88■□□□□ 0.45
PTCD3-220ENST00000627371 MPGP29372 298 aa17.88■□□□□ 0.45
PTCD3-220ENST00000627371 FOXG1P55316 489 aaPredicted RBP17.88■□□□□ 0.45
PTCD3-220ENST00000627371 BIDP55957 195 aa17.88■□□□□ 0.45
PTCD3-220ENST00000627371 LGALS3BPQ08380 585 aa17.88■□□□□ 0.45
PTCD3-220ENST00000627371 LAPTM4AQ15012 233 aa17.88■□□□□ 0.45
PTCD3-220ENST00000627371 ALG10Q5BKT4 473 aa17.88■□□□□ 0.45
PTCD3-220ENST00000627371 ANKRD34AQ69YU3 496 aa17.88■□□□□ 0.45
PTCD3-220ENST00000627371 OR4C15Q8NGM1 316 aa17.88■□□□□ 0.45
PTCD3-220ENST00000627371 OR51A7Q8NH64 312 aa17.88■□□□□ 0.45
PTCD3-220ENST00000627371 OR6X1Q8NH79 312 aa17.88■□□□□ 0.45
PTCD3-220ENST00000627371 UTP4Q969X6 686 aaKnown RBP17.88■□□□□ 0.45
PTCD3-220ENST00000627371 S100PBPQ96BU1 408 aa17.88■□□□□ 0.45
PTCD3-220ENST00000627371 REEP1Q9H902 201 aa17.88■□□□□ 0.45
PTCD3-220ENST00000627371 ZNF726A6NNF4 738 aa17.87■□□□□ 0.45
PTCD3-220ENST00000627371 ZNF587BE7ETH6 402 aa17.87■□□□□ 0.45
PTCD3-220ENST00000627371 OR10H3O60404 316 aa17.87■□□□□ 0.45
PTCD3-220ENST00000627371 CIB2O75838 187 aa17.87■□□□□ 0.45
PTCD3-220ENST00000627371 BCL10O95999 233 aa17.87■□□□□ 0.45
PTCD3-220ENST00000627371 IFNGR2P38484 337 aa17.87■□□□□ 0.45
PTCD3-220ENST00000627371 ERFP50548 548 aa17.87■□□□□ 0.45
PTCD3-220ENST00000627371 DAP3P51398 398 aaKnown RBP17.87■□□□□ 0.45
PTCD3-220ENST00000627371 PRPS1P60891 318 aa17.87■□□□□ 0.45
PTCD3-220ENST00000627371 CAMK2DQ13557 499 aa17.87■□□□□ 0.45
PTCD3-220ENST00000627371 MELKQ14680 651 aa17.87■□□□□ 0.45
PTCD3-220ENST00000627371 ZBED5Q49AG3 693 aa17.87■□□□□ 0.45
PTCD3-220ENST00000627371 C22orf34Q6ZV56 151 aa17.87■□□□□ 0.45
PTCD3-220ENST00000627371 LINGO2Q7L985 606 aa17.87■□□□□ 0.45
PTCD3-220ENST00000627371 ZER1Q7Z7L7 766 aa17.87■□□□□ 0.45
PTCD3-220ENST00000627371 WDFY1Q8IWB7 410 aa17.87■□□□□ 0.45
PTCD3-220ENST00000627371 C20orf196Q8IYI0 205 aa17.87■□□□□ 0.45
PTCD3-220ENST00000627371 LINC00471Q8N535 108 aa17.87■□□□□ 0.45
PTCD3-220ENST00000627371 LRRC75AQ8NAA5 344 aa17.87■□□□□ 0.45
PTCD3-220ENST00000627371 PAPD5Q8NDF8 572 aaKnown RBP17.87■□□□□ 0.45
PTCD3-220ENST00000627371 SLCO4A1Q96BD0 722 aa17.87■□□□□ 0.45
PTCD3-220ENST00000627371 RSRC1Q96IZ7 334 aaKnown RBP17.87■□□□□ 0.45
PTCD3-220ENST00000627371 LRR1Q96L50 414 aa17.87■□□□□ 0.45
PTCD3-220ENST00000627371 TNFRSF13CQ96RJ3 184 aa17.87■□□□□ 0.45
PTCD3-220ENST00000627371 YY1AP1Q9H869 796 aa17.87■□□□□ 0.45
PTCD3-220ENST00000627371 CCM2LQ9NUG4 571 aaPredicted RBP17.87■□□□□ 0.45
PTCD3-220ENST00000627371 VNN3Q9NY84 501 aa17.87■□□□□ 0.45
PTCD3-220ENST00000627371 ZNF226Q9NYT6 803 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms