RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 TAF11Q15544 211 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 ATP6AP1Q15904 470 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 MICAQ29983 383 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 MS4A18Q3C1V0 323 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 ANKDD1AQ495B1 522 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 PGBD2Q6P3X8 592 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 CREB3L2Q70SY1 520 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 AAED1Q7RTV5 226 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 PXKQ7Z7A4 578 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 ZER1Q7Z7L7 766 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 LUZP2Q86TE4 346 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 AQP11Q8NBQ7 271 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 OR10G2Q8NGC3 310 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 OR51A7Q8NH64 312 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 GNPDA2Q8TDQ7 276 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 TMEM45BQ96B21 275 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 APH1AQ96BI3 265 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 LRRC46Q96FV0 321 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 ZNF385AQ96PM9 386 aaKnown RBP13.04□□□□□ -0.32
PNKP-221ENST00000627317 OPN3Q9H1Y3 402 aaPredicted RBP13.04□□□□□ -0.32
PNKP-221ENST00000627317 MCCC2Q9HCC0 563 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 PARPBPQ9NWS1 579 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 TAS2R5Q9NYW4 299 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 KCNN3Q9UGI6 736 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 HIF3AQ9Y2N7 669 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 CREBBPQ92793 2442 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 A0A1W2PRG6 482 aa13.03□□□□□ -0.32
PNKP-221ENST00000627317 TRAF3IP2O43734 574 aaPredicted RBP13.03□□□□□ -0.32
PNKP-221ENST00000627317 ENTPD5O75356 428 aa13.03□□□□□ -0.32
PNKP-221ENST00000627317 FPR3P25089 353 aa13.03□□□□□ -0.32
PNKP-221ENST00000627317 OR3A2P47893 321 aa13.03□□□□□ -0.32
PNKP-221ENST00000627317 ARHGDIAP52565 204 aa13.03□□□□□ -0.32
PNKP-221ENST00000627317 CLDN17P56750 224 aa13.03□□□□□ -0.32
PNKP-221ENST00000627317 RPS4XP62701 263 aaKnown RBP13.03□□□□□ -0.32
PNKP-221ENST00000627317 ZBED5Q49AG3 693 aa13.03□□□□□ -0.32
PNKP-221ENST00000627317 ALG10Q5BKT4 473 aa13.03□□□□□ -0.32
PNKP-221ENST00000627317 TFAP2EQ6VUC0 442 aa13.03□□□□□ -0.32
PNKP-221ENST00000627317 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.03□□□□□ -0.32
PNKP-221ENST00000627317 EPHX4Q8IUS5 362 aa13.03□□□□□ -0.32
PNKP-221ENST00000627317 MOSPD2Q8NHP6 518 aa13.03□□□□□ -0.32
PNKP-221ENST00000627317 GIPC3Q8TF64 312 aa13.03□□□□□ -0.32
PNKP-221ENST00000627317 LRTOMTQ8WZ04 291 aa13.03□□□□□ -0.32
PNKP-221ENST00000627317 BDH2Q9BUT1 245 aa13.03□□□□□ -0.32
PNKP-221ENST00000627317 PLSCR4Q9NRQ2 329 aa13.03□□□□□ -0.32
PNKP-221ENST00000627317 INIPQ9NRY2 104 aa13.03□□□□□ -0.32
PNKP-221ENST00000627317 RCE1Q9Y256 329 aa13.03□□□□□ -0.32
PNKP-221ENST00000627317 ARRDC5A6NEK1 342 aa13.02□□□□□ -0.33
PNKP-221ENST00000627317 MCIDASD6RGH6 385 aa13.02□□□□□ -0.33
PNKP-221ENST00000627317 KLF4O43474 513 aa13.02□□□□□ -0.33
PNKP-221ENST00000627317 CGAP01215 116 aa13.02□□□□□ -0.33
PNKP-221ENST00000627317 F13BP05160 661 aa13.02□□□□□ -0.33
PNKP-221ENST00000627317 HLA-DOBP13765 273 aa13.02□□□□□ -0.33
PNKP-221ENST00000627317 IFNGR1P15260 489 aa13.02□□□□□ -0.33
PNKP-221ENST00000627317 GSSP48637 474 aa13.02□□□□□ -0.33
PNKP-221ENST00000627317 PRPS1P60891 318 aa13.02□□□□□ -0.33
PNKP-221ENST00000627317 TLE4Q04727 773 aa13.02□□□□□ -0.33
PNKP-221ENST00000627317 TSPAN31Q12999 210 aa13.02□□□□□ -0.33
PNKP-221ENST00000627317 C1orf94Q6P1W5 598 aa13.02□□□□□ -0.33
PNKP-221ENST00000627317 NIPAL3Q6P499 406 aa13.02□□□□□ -0.33
PNKP-221ENST00000627317 SLC35D2Q76EJ3 337 aa13.02□□□□□ -0.33
PNKP-221ENST00000627317 ZNF771Q7L3S4 317 aaPredicted RBP13.02□□□□□ -0.33
PNKP-221ENST00000627317 AMIGO2Q86SJ2 522 aa13.02□□□□□ -0.33
PNKP-221ENST00000627317 ZIC4Q8N9L1 334 aa13.02□□□□□ -0.33
PNKP-221ENST00000627317 ZNF610Q8N9Z0 462 aa13.02□□□□□ -0.33
PNKP-221ENST00000627317 FANK1Q8TC84 345 aa13.02□□□□□ -0.33
PNKP-221ENST00000627317 RNASE6Q93091 150 aaKnown RBP13.02□□□□□ -0.33
PNKP-221ENST00000627317 GTPBP3Q969Y2 492 aaKnown RBP13.02□□□□□ -0.33
PNKP-221ENST00000627317 TNFRSF13CQ96RJ3 184 aa13.02□□□□□ -0.33
PNKP-221ENST00000627317 GPA33Q99795 319 aa13.02□□□□□ -0.33
PNKP-221ENST00000627317 RBM24Q9BX46 236 aaKnown RBP13.02□□□□□ -0.33
PNKP-221ENST00000627317 FANCFQ9NPI8 374 aa13.02□□□□□ -0.33
PNKP-221ENST00000627317 MED29Q9NX70 200 aa13.02□□□□□ -0.33
PNKP-221ENST00000627317 PDP1Q9P0J1 537 aaPredicted RBP13.02□□□□□ -0.33
PNKP-221ENST00000627317 MGAT4BQ9UQ53 548 aa13.02□□□□□ -0.33
PNKP-221ENST00000627317 CCDC168Q8NDH2 2452 aa13.02□□□□□ -0.33
PNKP-221ENST00000627317 ZNF726A6NNF4 738 aa13.01□□□□□ -0.33
PNKP-221ENST00000627317 A8MXE2 369 aa13.01□□□□□ -0.33
PNKP-221ENST00000627317 H3BNX3 289 aa13.01□□□□□ -0.33
PNKP-221ENST00000627317 SLC43A1O75387 559 aa13.01□□□□□ -0.33
PNKP-221ENST00000627317 NDUFB2O95178 105 aa13.01□□□□□ -0.33
PNKP-221ENST00000627317 TSPAN19P0C672 248 aa13.01□□□□□ -0.33
PNKP-221ENST00000627317 RPL4P36578 427 aaKnown RBP13.01□□□□□ -0.33
PNKP-221ENST00000627317 DAP3P51398 398 aaKnown RBP13.01□□□□□ -0.33
PNKP-221ENST00000627317 TOP3AQ13472 1001 aaPredicted RBP13.01□□□□□ -0.33
PNKP-221ENST00000627317 ZNF770Q6IQ21 691 aaPredicted RBP13.01□□□□□ -0.33
PNKP-221ENST00000627317 SHQ1Q6PI26 577 aaKnown RBP13.01□□□□□ -0.33
PNKP-221ENST00000627317 HDDC2Q7Z4H3 204 aa13.01□□□□□ -0.33
PNKP-221ENST00000627317 TMEM179BQ7Z7N9 219 aa13.01□□□□□ -0.33
PNKP-221ENST00000627317 LURAP1LQ8IV03 231 aa13.01□□□□□ -0.33
PNKP-221ENST00000627317 UBE2J2Q8N2K1 259 aa13.01□□□□□ -0.33
PNKP-221ENST00000627317 OR5K1Q8NHB7 308 aa13.01□□□□□ -0.33
PNKP-221ENST00000627317 NRBF2Q96F24 287 aa13.01□□□□□ -0.33
PNKP-221ENST00000627317 SLCO5A1Q9H2Y9 848 aa13.01□□□□□ -0.33
PNKP-221ENST00000627317 NTN4Q9HB63 628 aa13.01□□□□□ -0.33
PNKP-221ENST00000627317 S100A14Q9HCY8 104 aa13.01□□□□□ -0.33
PNKP-221ENST00000627317 KIF17Q9P2E2 1029 aa13.01□□□□□ -0.33
PNKP-221ENST00000627317 SIGLEC7Q9Y286 467 aa13.01□□□□□ -0.33
PNKP-221ENST00000627317 OR6C65A6NJZ3 312 aa13□□□□□ -0.33
PNKP-221ENST00000627317 KRT33AO76009 404 aa13□□□□□ -0.33
PNKP-221ENST00000627317 BCL10O95999 233 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms