RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 TBX5Q99593 518 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 MFRPQ9BY79 579 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 AKIRIN1Q9H9L7 192 aaPredicted RBP14.77□□□□□ -0.04
LDB3-208ENST00000623007 MED11Q9P086 117 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 FBXL4Q9UKA2 621 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 FARSAQ9Y285 508 aaKnown RBP14.77□□□□□ -0.04
LDB3-208ENST00000623007 TRAPPC4Q9Y296 219 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 CMAHPQ9Y471 501 aa14.77□□□□□ -0.04
LDB3-208ENST00000623007 COL27A1Q8IZC6 1860 aaPredicted RBP14.77□□□□□ -0.05
LDB3-208ENST00000623007 PRSS37A4D1T9 235 aa14.77□□□□□ -0.05
LDB3-208ENST00000623007 ZNF354AO60765 605 aaPredicted RBP14.77□□□□□ -0.05
LDB3-208ENST00000623007 UPK1BO75841 260 aa14.77□□□□□ -0.05
LDB3-208ENST00000623007 PYCR1P32322 319 aa14.77□□□□□ -0.05
LDB3-208ENST00000623007 SDC2P34741 201 aa14.77□□□□□ -0.05
LDB3-208ENST00000623007 PTGDSP41222 190 aa14.77□□□□□ -0.05
LDB3-208ENST00000623007 FOXL2P58012 376 aa14.77□□□□□ -0.05
LDB3-208ENST00000623007 DEFA1P59665 94 aa14.77□□□□□ -0.05
LDB3-208ENST00000623007 DEFA3P59666 94 aa14.77□□□□□ -0.05
LDB3-208ENST00000623007 MESTQ5EB52 335 aa14.77□□□□□ -0.05
LDB3-208ENST00000623007 ZNF544Q6NX49 715 aa14.77□□□□□ -0.05
LDB3-208ENST00000623007 B3GLCTQ6Y288 498 aa14.77□□□□□ -0.05
LDB3-208ENST00000623007 PXKQ7Z7A4 578 aa14.77□□□□□ -0.05
LDB3-208ENST00000623007 ZBTB46Q86UZ6 589 aa14.77□□□□□ -0.05
LDB3-208ENST00000623007 OR2M3Q8NG83 312 aa14.77□□□□□ -0.05
LDB3-208ENST00000623007 ZNF519Q8TB69 540 aa14.77□□□□□ -0.05
LDB3-208ENST00000623007 ASB17Q8WXJ9 295 aa14.77□□□□□ -0.05
LDB3-208ENST00000623007 KIAA1143Q96AT1 154 aaPredicted RBP14.77□□□□□ -0.05
LDB3-208ENST00000623007 TRMT61AQ96FX7 289 aaKnown RBP14.77□□□□□ -0.05
LDB3-208ENST00000623007 COX4I2Q96KJ9 171 aa14.77□□□□□ -0.05
LDB3-208ENST00000623007 IP6K3Q96PC2 410 aa14.77□□□□□ -0.05
LDB3-208ENST00000623007 EDEM2Q9BV94 578 aa14.77□□□□□ -0.05
LDB3-208ENST00000623007 ANGPTL4Q9BY76 406 aa14.77□□□□□ -0.05
LDB3-208ENST00000623007 CHST11Q9NPF2 352 aa14.77□□□□□ -0.05
LDB3-208ENST00000623007 HDGFL3Q9Y3E1 203 aa14.77□□□□□ -0.05
LDB3-208ENST00000623007 CHCHD2Q9Y6H1 151 aaPredicted RBP14.77□□□□□ -0.05
LDB3-208ENST00000623007 A0A1W2PNV4 684 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 RGS5O15539 181 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 ARHGEF9O43307 516 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 GMFGO60234 142 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 TFP02787 698 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 NR2C1P13056 603 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 TCN2P20062 427 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 AHCYP23526 432 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 ACVR1BP36896 505 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 CD79BP40259 229 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 MLF1P58340 268 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 PPP3R1P63098 170 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 HNRNPA0Q13151 305 aaKnown RBP14.76□□□□□ -0.05
LDB3-208ENST00000623007 CDK5R1Q15078 307 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 ACKR1Q16570 336 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 SLC22A10Q63ZE4 541 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 JMJD6Q6NYC1 403 aaPredicted RBP14.76□□□□□ -0.05
LDB3-208ENST00000623007 METAP1DQ6UB28 335 aaPredicted RBP14.76□□□□□ -0.05
LDB3-208ENST00000623007 C16orf47Q6ZP98 133 aaPredicted RBP14.76□□□□□ -0.05
LDB3-208ENST00000623007 PLCZ1Q86YW0 608 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 TMEM156Q8N614 296 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 PAQR8Q8TEZ7 354 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 INTS14Q96SY0 518 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 MROQ9BYG7 248 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 WDR76Q9H967 626 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 GALNT9Q9HCQ5 603 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 HPF1Q9NWY4 346 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 NCDNQ9UBB6 729 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 PISDQ9UG56 409 aa14.76□□□□□ -0.05
LDB3-208ENST00000623007 ANKRD61A6NGH8 418 aa14.75□□□□□ -0.05
LDB3-208ENST00000623007 ZNF432O94892 652 aa14.75□□□□□ -0.05
LDB3-208ENST00000623007 MT-CO3P00414 261 aa14.75□□□□□ -0.05
LDB3-208ENST00000623007 KRT8P05787 483 aa14.75□□□□□ -0.05
LDB3-208ENST00000623007 NAA10P41227 235 aaPredicted RBP14.75□□□□□ -0.05
LDB3-208ENST00000623007 OR12D2P58182 307 aa14.75□□□□□ -0.05
LDB3-208ENST00000623007 FOXF1Q12946 379 aa14.75□□□□□ -0.05
LDB3-208ENST00000623007 ATP1A4Q13733 1029 aa14.75□□□□□ -0.05
LDB3-208ENST00000623007 TRIM16LQ309B1 348 aa14.75□□□□□ -0.05
LDB3-208ENST00000623007 GLYR1Q49A26 553 aaPredicted RBP14.75□□□□□ -0.05
LDB3-208ENST00000623007 GXYLT1Q4G148 440 aa14.75□□□□□ -0.05
LDB3-208ENST00000623007 ARL9Q6T311 187 aa14.75□□□□□ -0.05
LDB3-208ENST00000623007 PARP16Q8N5Y8 322 aa14.75□□□□□ -0.05
LDB3-208ENST00000623007 ZFP41Q8N8Y5 198 aa14.75□□□□□ -0.05
LDB3-208ENST00000623007 ZNF454Q8N9F8 522 aa14.75□□□□□ -0.05
LDB3-208ENST00000623007 ZNF417Q8TAU3 575 aa14.75□□□□□ -0.05
LDB3-208ENST00000623007 ZNF524Q96C55 264 aa14.75□□□□□ -0.05
LDB3-208ENST00000623007 ZNF587Q96SQ5 575 aaPredicted RBP14.75□□□□□ -0.05
LDB3-208ENST00000623007 HDHD5Q9BXW7 423 aa14.75□□□□□ -0.05
LDB3-208ENST00000623007 ZMIZ1Q9ULJ6 1067 aa14.75□□□□□ -0.05
LDB3-208ENST00000623007 RPH3AQ9Y2J0 694 aaPredicted RBP14.75□□□□□ -0.05
LDB3-208ENST00000623007 KMT2EQ8IZD2 1858 aa14.75□□□□□ -0.05
LDB3-208ENST00000623007 NPIPA5E9PKD4 350 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 SERPINI2O75830 405 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 SC5DO75845 299 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 TFPIP10646 304 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 TLE3Q04726 772 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 GLO1Q04760 184 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 ZNF239Q16600 458 aaKnown RBP14.74□□□□□ -0.05
LDB3-208ENST00000623007 YIF1BQ5BJH7 314 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 VASNQ6EMK4 673 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 RAB43Q86YS6 212 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 TIGD4Q8IY51 512 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 ABHD4Q8TB40 342 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 TMEM41AQ96HV5 264 aa14.74□□□□□ -0.05
LDB3-208ENST00000623007 KCNS3Q9BQ31 491 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms