RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 TRAPPC6AO75865 159 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 LALBAP00709 142 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 APOC3P02656 99 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 NPR2P20594 1047 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 ALKBH1Q13686 389 aaKnown RBP11.78□□□□□ -0.52
MSH6-215ENST00000622629 ZIC1Q15915 447 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 ZNF425Q6IV72 752 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 NDUFAF7Q7L592 441 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 TSEN54Q7Z6J9 526 aaKnown RBP11.78□□□□□ -0.52
MSH6-215ENST00000622629 CD163Q86VB7 1156 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 OR52I2Q8NH67 350 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 SLC2A12Q8TD20 617 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 SHDQ96IW2 340 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 HHLA2Q9UM44 414 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 EVI2BP34910 448 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 SRSF5Q13243 272 aaKnown RBP11.78□□□□□ -0.52
MSH6-215ENST00000622629 CBFBQ13951 182 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 RAB12Q6IQ22 244 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 BCORP1Q8N888 145 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 MR1Q95460 341 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 WDFY2Q96P53 400 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 MBD2Q9UBB5 411 aa11.78□□□□□ -0.52
MSH6-215ENST00000622629 C19orf25Q9UFG5 118 aaPredicted RBP11.78□□□□□ -0.52
MSH6-215ENST00000622629 MEGF11A6BM72 1044 aa11.77□□□□□ -0.52
MSH6-215ENST00000622629 SC5DO75845 299 aa11.77□□□□□ -0.52
MSH6-215ENST00000622629 C1QBP02746 253 aa11.77□□□□□ -0.52
MSH6-215ENST00000622629 COL9A1P20849 921 aa11.77□□□□□ -0.52
MSH6-215ENST00000622629 GZMKP49863 264 aa11.77□□□□□ -0.52
MSH6-215ENST00000622629 DIO1P49895 249 aa11.77□□□□□ -0.52
MSH6-215ENST00000622629 CDK5R1Q15078 307 aa11.77□□□□□ -0.52
MSH6-215ENST00000622629 SGCBQ16585 318 aa11.77□□□□□ -0.52
MSH6-215ENST00000622629 EEF1A1P5Q5VTE0 462 aa11.77□□□□□ -0.52
MSH6-215ENST00000622629 HACD4Q5VWC8 232 aa11.77□□□□□ -0.52
MSH6-215ENST00000622629 ZNF770Q6IQ21 691 aaPredicted RBP11.77□□□□□ -0.52
MSH6-215ENST00000622629 FAAP20Q6NZ36 180 aa11.77□□□□□ -0.52
MSH6-215ENST00000622629 GPR155Q7Z3F1 870 aa11.77□□□□□ -0.52
MSH6-215ENST00000622629 MRI1Q9BV20 369 aa11.77□□□□□ -0.52
MSH6-215ENST00000622629 RARRES3Q9UL19 164 aa11.77□□□□□ -0.52
MSH6-215ENST00000622629 HS3ST3A1Q9Y663 406 aa11.77□□□□□ -0.52
MSH6-215ENST00000622629 IGKV1-8A0A0C4DH67 115 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 MNX1P50219 401 aaPredicted RBP11.77□□□□□ -0.53
MSH6-215ENST00000622629 MRPS10P82664 201 aaKnown RBP11.77□□□□□ -0.53
MSH6-215ENST00000622629 NKAPLQ5M9Q1 402 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 MRM1Q6IN84 353 aaKnown RBP11.77□□□□□ -0.53
MSH6-215ENST00000622629 ZNF615Q8N8J6 731 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 CRB3Q9BUF7 120 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 CHMP1AQ9HD42 196 aaPredicted RBP11.77□□□□□ -0.53
MSH6-215ENST00000622629 PRDM9Q9NQV7 894 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 TAS2R3Q9NYW6 316 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 TEX13DA0A0J9YY54 714 aaPredicted RBP11.77□□□□□ -0.53
MSH6-215ENST00000622629 PRAMEF27A3QJZ7 478 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 ZNF736B4DX44 427 aaPredicted RBP11.77□□□□□ -0.53
MSH6-215ENST00000622629 SUSD5O60279 629 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 MPIG6BO95866 241 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 CT62P0C5K7 136 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 EMP2P54851 167 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 GFERP55789 205 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 DLX5P56178 289 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 GRK1Q15835 563 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 KIAA0907Q7Z7F0 614 aaPredicted RBP11.77□□□□□ -0.53
MSH6-215ENST00000622629 PLPP7Q8NBV4 271 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 C17orf47Q8NEP4 570 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 SMIM19Q96E16 107 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 LHX9Q9NQ69 397 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 ZNF701Q9NV72 531 aaPredicted RBP11.77□□□□□ -0.53
MSH6-215ENST00000622629 SLC6A5Q9Y345 797 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 IGHV3-20A0A0C4DH32 117 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 AKAIN1P0CW23 69 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 HSD17B7P56937 341 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 CXADRP78310 365 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 VWA2Q5GFL6 755 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 RAET1LQ5VY80 246 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 AWAT2Q6E213 333 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 LINC00346Q8IVM7 164 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 GLB1L2Q8IW92 636 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 DVL3Q92997 716 aaPredicted RBP11.77□□□□□ -0.53
MSH6-215ENST00000622629 TSLPQ969D9 159 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 PGAM5Q96HS1 289 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 BMFQ96LC9 184 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 OR5B2Q96R09 309 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 MFFQ9GZY8 342 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 EVA1AQ9H8M9 152 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 WDR76Q9H967 626 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 FGF21Q9NSA1 209 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 MOKQ9UQ07 419 aa11.77□□□□□ -0.53
MSH6-215ENST00000622629 TEX46H3BTG2 121 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 SCGB1D2O95969 90 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 CSF1P09603 554 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 ZNF43P17038 809 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 MAGEB1P43366 347 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 ELP2Q6IA86 826 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 ALKBH2Q6NS38 261 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 ACBD4Q8NC06 268 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 OR5L2Q8NGL0 311 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 NT5CQ8TCD5 201 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 SLC46A1Q96NT5 459 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 NXF5Q9H1B4 397 aaKnown RBP11.76□□□□□ -0.53
MSH6-215ENST00000622629 MIXL1Q9H2W2 232 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 AUNIPQ9H7T9 357 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 MAN2C1Q9NTJ4 1040 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms