RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 IGFBP1P08833 259 aaPredicted RBP6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 MPZP25189 248 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 TIA1P31483 386 aaKnown RBP eCLIP6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 CASRP41180 1078 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 PCBP3P57721 371 aaKnown RBP6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 SNRPD1P62314 119 aaKnown RBP6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 RAB1AP62820 205 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 OC90Q02509 493 aaPredicted RBP6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 CLINT1Q14677 625 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 GINS1Q14691 196 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 RHEBQ15382 184 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 TEAD2Q15562 447 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 PNLIPRP3Q17RR3 467 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 DCAF10Q5QP82 559 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 C9orf64Q5T6V5 341 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 IER5LQ5T953 404 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 NKAIN2Q5VXU1 208 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 C11orf87Q6NUJ2 197 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 Q6ZVL8 140 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 CAMKMTQ7Z624 323 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 CDK20Q8IZL9 346 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 BEST3Q8N1M1 668 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 IQCF1Q8N6M8 205 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 OR51S1Q8NGJ8 323 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 FIBINQ8TAL6 211 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 FCAMRQ8WWV6 532 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 NEIL2Q969S2 332 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 NECAB3Q96P71 396 aaPredicted RBP6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 TGM7Q96PF1 710 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 ZNF649Q9BS31 505 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 SLC35A5Q9BS91 424 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 TRMT61BQ9BVS5 477 aaKnown RBP6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 RSPO3Q9BXY4 272 aaPredicted RBP6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 OR51B6Q9H340 312 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 GAL3ST2Q9H3Q3 398 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 TMEM231Q9H6L2 316 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 LMAN1LQ9HAT1 526 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 RHOFQ9HBH0 211 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 MEPEQ9NQ76 525 aaPredicted RBP6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 TAS2R10Q9NYW0 307 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 COMMD9Q9P000 198 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 SLC27A6Q9Y2P4 619 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 CKAP5Q14008 2032 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 DENND4CQ5VZ89 1909 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 TRAV1-2A0A0B4J238 106 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 ZNF726A6NNF4 738 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 F5H0A9 414 aaPredicted RBP6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 PYCARD-AS1I3L0S3 204 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 SULT2B1O00204 365 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 MAGEB4O15481 346 aaPredicted RBP6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 PIP5K1CO60331 668 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 SOD2P04179 222 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 CD5P06127 495 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 H1F0P07305 194 aaKnown RBP6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 EPCAMP16422 314 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 HTR2CP28335 458 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 CDH11P55287 796 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 CCL23P55773 120 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 TAS2R43P59537 309 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 CSRP2Q16527 193 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 ZNF791Q3KP31 576 aaPredicted RBP6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 SLC25A35Q3KQZ1 300 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 POM121L1PQ3SYA9 428 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 AWAT1Q58HT5 328 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 ZNF385CQ66K41 422 aaPredicted RBP6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 PRSS45Q7RTY3 260 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 PXKQ7Z7A4 578 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 TMPRSS11BQ86T26 416 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 HSD17B11Q8NBQ5 300 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 SLC24A4Q8NFF2 622 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 OR5D16Q8NGK9 328 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 OR52I2Q8NH67 350 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 PTCHD1Q96NR3 888 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 PRM3Q9NNZ6 103 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 TRIM36Q9NQ86 728 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 MRPL15Q9P015 296 aaKnown RBP6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 CCDC88CQ9P219 2028 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 FBXW2Q9UKT8 454 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 CCL26Q9Y258 94 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 HS3ST2Q9Y278 367 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 FLVCR1Q9Y5Y0 555 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 MTCH2Q9Y6C9 303 aa6.88□□□□□ -1.31
TRIM49B-202ENST00000622138 A0A087WUJ7 227 aa6.87□□□□□ -1.31
TRIM49B-202ENST00000622138 OR5H15A6NDH6 313 aa6.87□□□□□ -1.31
TRIM49B-202ENST00000622138 TBC1D3BA6NDS4 549 aa6.87□□□□□ -1.31
TRIM49B-202ENST00000622138 MGAT4DA6NG13 374 aa6.87□□□□□ -1.31
TRIM49B-202ENST00000622138 OR5H1A6NKK0 313 aa6.87□□□□□ -1.31
TRIM49B-202ENST00000622138 A8MXE2 369 aa6.87□□□□□ -1.31
TRIM49B-202ENST00000622138 RNASEK-C17orf49H0YIS7 233 aa6.87□□□□□ -1.31
TRIM49B-202ENST00000622138 ACOT7O00154 380 aa6.87□□□□□ -1.31
TRIM49B-202ENST00000622138 RNASET2O00584 256 aaKnown RBP6.87□□□□□ -1.31
TRIM49B-202ENST00000622138 DVL2O14641 736 aa6.87□□□□□ -1.31
TRIM49B-202ENST00000622138 HSPA12AO43301 675 aa6.87□□□□□ -1.31
TRIM49B-202ENST00000622138 FBXO24O75426 580 aa6.87□□□□□ -1.31
TRIM49B-202ENST00000622138 PCDH8O95206 1070 aa6.87□□□□□ -1.31
TRIM49B-202ENST00000622138 RLN1P04808 185 aa6.87□□□□□ -1.31
TRIM49B-202ENST00000622138 SNRPCP09234 159 aaKnown RBP6.87□□□□□ -1.31
TRIM49B-202ENST00000622138 TBC1D3HP0C7X1 549 aa6.87□□□□□ -1.31
TRIM49B-202ENST00000622138 ARAFP10398 606 aa6.87□□□□□ -1.31
TRIM49B-202ENST00000622138 SNRPBP14678 240 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms