RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	ARID1B	Q8NFD5	2236 aa	Predicted RBP	13.17	□□□□□ -0.3
SYNRG-231	ENST00000622045	OBSL1	O75147	1896 aa		13.17	□□□□□ -0.3
SYNRG-231	ENST00000622045	FAM25E	A8MYX2	175 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	LDB3	O75112	727 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	GP1BA	P07359	652 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	NID1	P14543	1247 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	PAN3	Q58A45	887 aa	Known RBP	13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	CNN2	Q99439	309 aa	Known RBP	13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	PDCD10	Q9BUL8	212 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	CREBZF	Q9NS37	354 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	FBXO4	Q9UKT5	387 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	SLC27A6	Q9Y2P4	619 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	TRAV14DV4	A0A0A6YYC5	116 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	SULT1C2	O00338	296 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	MAS1	P04201	325 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	FABP1	P07148	127 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	HOXB1	P14653	301 aa	Predicted RBP	13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	NFYB	P25208	207 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	SRSF3	P84103	164 aa	Known RBP	13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	POU4F2	Q12837	409 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	ZNF528	Q3MIS6	628 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	SAMD14	Q8IZD0	417 aa	Predicted RBP	13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	MFSD9	Q8NBP5	474 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	RAB7B	Q96AH8	199 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	FBXO17	Q96EF6	278 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	VRK1	Q99986	396 aa	Predicted RBP	13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	BARX1	Q9HBU1	254 aa	Predicted RBP	13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	MEPE	Q9NQ76	525 aa	Predicted RBP	13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	IER3IP1	Q9Y5U9	82 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	FBXO45	P0C2W1	286 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	UBB	P0CG47	229 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	UBC	P0CG48	685 aa	Known RBP	13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	ATXN8OS	P0DMR3	200 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	SNRPE	P62304	92 aa	Known RBP	13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	ACTA2	P62736	377 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	RPS27A	P62979	156 aa	Known RBP	13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	UBA52	P62987	128 aa	Known RBP	13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	ACTG2	P63267	376 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	GXYLT1	Q4G148	440 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	LIN54	Q6MZP7	749 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	TMEM71	Q6P5X7	295 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	TMPRSS11F	Q6ZWK6	438 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	LURAP1L	Q8IV03	231 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	GLB1L2	Q8IW92	636 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	SVBP	Q8N300	66 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	OR1M1	Q8NGA1	313 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	PTDSS2	Q9BVG9	487 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	C14orf105	Q9NVL8	296 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	ZNF337	Q9Y3M9	751 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	DENND4C	Q5VZ89	1909 aa		13.16	□□□□□ -0.3
SYNRG-231	ENST00000622045	TMEM218	A2RU14	115 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	OTOL1	A6NHN0	477 aa	Predicted RBP	13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	THBS1	P07996	1170 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	ACAA1	P09110	424 aa	Predicted RBP	13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	ADCYAP1	P18509	176 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	ARFIP1	P53367	373 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	ARHGAP11A	Q6P4F7	1023 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	SLC35F2	Q8IXU6	374 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	HSPA12B	Q96MM6	686 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	TINAGL1	Q9GZM7	467 aa	Predicted RBP	13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	TREM1	Q9NP99	234 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	ZNF346	Q9UL40	294 aa	Known RBP	13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	ALPK2	Q86TB3	2170 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	OR6C76	A6NM76	312 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	B3GALT2	O43825	422 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	CSN2	P05814	226 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	RPA2	P15927	270 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	MGMT	P16455	207 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	NPBWR1	P48145	328 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	S100A12	P80511	92 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	IL10RA	Q13651	578 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	EXOSC7	Q15024	291 aa	Known RBP	13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	IRF4	Q15306	451 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	H3F3C	Q6NXT2	135 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	NUDT18	Q6ZVK8	323 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	SPAG16	Q8N0X2	631 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	MRPL43	Q8N983	215 aa	Known RBP	13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	SLC22A8	Q8TCC7	542 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	PAQR8	Q8TEZ7	354 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	ZNRF4	Q8WWF5	429 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	C2orf42	Q9NWW7	574 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	KCNK7	Q9Y2U2	307 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	LOC100509620	A0A075B734	347 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	OGG1	O15527	345 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	OR2T7	P0C7T2	308 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	HIST1H1C	P16403	213 aa	Known RBP	13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	RFC3	P40938	356 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	RIPPLY1	Q0D2K3	151 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	SMAD2	Q15796	467 aa	Known RBP	13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	PRRT3	Q5FWE3	981 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	ALG10B	Q5I7T1	473 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	OR2T27	Q8NH04	317 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	GAL3ST3	Q96A11	431 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	TCF7L1	Q9HCS4	588 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	PRSS16	Q9NQE7	514 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045	NIT2	Q9NQR4	276 aa		13.15	□□□□□ -0.3
SYNRG-231	ENST00000622045		F5H0A9	414 aa	Predicted RBP	13.14	□□□□□ -0.31
SYNRG-231	ENST00000622045	FADS1	O60427	444 aa		13.14	□□□□□ -0.31
SYNRG-231	ENST00000622045	RNGTT	O60942	597 aa	Known RBP	13.14	□□□□□ -0.31
SYNRG-231	ENST00000622045	RD3L	P0DJH9	198 aa		13.14	□□□□□ -0.31

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