RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 SMAP2Q8WU79 429 aaPredicted RBP19.31■□□□□ 0.68
SPAST-204ENST00000621856 TSSK2Q96PF2 358 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 UBL7Q96S82 380 aaPredicted RBP19.31■□□□□ 0.68
SPAST-204ENST00000621856 CENPOQ9BU64 300 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 ALG12Q9BV10 488 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 DCSTAMPQ9H295 470 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 SRA1Q9HD15 236 aaKnown RBP19.31■□□□□ 0.68
SPAST-204ENST00000621856 MOKQ9UQ07 419 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 PCDHGB7Q9Y5F8 929 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 A0A0G2JMM0 328 aa19.3■□□□□ 0.68
SPAST-204ENST00000621856 A0A1W2PPB8 328 aa19.3■□□□□ 0.68
SPAST-204ENST00000621856 A0A1W2PRS3 328 aa19.3■□□□□ 0.68
SPAST-204ENST00000621856 KIR3DP1A8MWS1 328 aa19.3■□□□□ 0.68
SPAST-204ENST00000621856 AKAP8O43823 692 aaKnown RBP19.3■□□□□ 0.68
SPAST-204ENST00000621856 TRIM3O75382 744 aaPredicted RBP19.3■□□□□ 0.68
SPAST-204ENST00000621856 IGHMP01871 453 aa19.3■□□□□ 0.68
SPAST-204ENST00000621856 FKBP2P26885 142 aaKnown RBP19.3■□□□□ 0.68
SPAST-204ENST00000621856 SFTPDP35247 375 aa19.3■□□□□ 0.68
SPAST-204ENST00000621856 OR2B6P58173 313 aa19.3■□□□□ 0.68
SPAST-204ENST00000621856 TOMM20Q15388 145 aa19.3■□□□□ 0.68
SPAST-204ENST00000621856 USP43Q70EL4 1123 aa19.3■□□□□ 0.68
SPAST-204ENST00000621856 KLBQ86Z14 1044 aa19.3■□□□□ 0.68
SPAST-204ENST00000621856 SLC35F2Q8IXU6 374 aa19.3■□□□□ 0.68
SPAST-204ENST00000621856 KDM8Q8N371 416 aa19.3■□□□□ 0.68
SPAST-204ENST00000621856 ZFP41Q8N8Y5 198 aa19.3■□□□□ 0.68
SPAST-204ENST00000621856 EXD3Q8N9H8 876 aa19.3■□□□□ 0.68
SPAST-204ENST00000621856 ZNF519Q8TB69 540 aa19.3■□□□□ 0.68
SPAST-204ENST00000621856 ADAMTS14Q8WXS8 1223 aa19.3■□□□□ 0.68
SPAST-204ENST00000621856 LRFN1Q9P244 771 aa19.3■□□□□ 0.68
SPAST-204ENST00000621856 STUB1Q9UNE7 303 aa19.3■□□□□ 0.68
SPAST-204ENST00000621856 MUC6Q6W4X9 2439 aa19.29■□□□□ 0.68
SPAST-204ENST00000621856 A0A1W2PNR3 127 aa19.29■□□□□ 0.68
SPAST-204ENST00000621856 MS4A18H0YCH9 400 aa19.29■□□□□ 0.68
SPAST-204ENST00000621856 TM4SF5O14894 197 aa19.29■□□□□ 0.68
SPAST-204ENST00000621856 SELENOFO60613 162 aa19.29■□□□□ 0.68
SPAST-204ENST00000621856 GPX5O75715 221 aa19.29■□□□□ 0.68
SPAST-204ENST00000621856 AKR7A3O95154 331 aa19.29■□□□□ 0.68
SPAST-204ENST00000621856 UGT2B10P36537 528 aa19.29■□□□□ 0.68
SPAST-204ENST00000621856 ZNF85Q03923 595 aa19.29■□□□□ 0.68
SPAST-204ENST00000621856 TPBGQ13641 420 aa19.29■□□□□ 0.68
SPAST-204ENST00000621856 MELKQ14680 651 aa19.29■□□□□ 0.68
SPAST-204ENST00000621856 DGUOKQ16854 277 aa19.29■□□□□ 0.68
SPAST-204ENST00000621856 MS4A18Q3C1V0 323 aa19.29■□□□□ 0.68
SPAST-204ENST00000621856 TMEM176BQ3YBM2 270 aaPredicted RBP19.29■□□□□ 0.68
SPAST-204ENST00000621856 ASCL5Q7RTU5 278 aa19.29■□□□□ 0.68
SPAST-204ENST00000621856 ZNF227Q86WZ6 799 aa19.29■□□□□ 0.68
SPAST-204ENST00000621856 DYNC2LI1Q8TCX1 351 aa19.29■□□□□ 0.68
SPAST-204ENST00000621856 ZFAND2BQ8WV99 257 aa19.29■□□□□ 0.68
SPAST-204ENST00000621856 RERGLQ9H628 205 aa19.29■□□□□ 0.68
SPAST-204ENST00000621856 RNF167Q9H6Y7 350 aa19.29■□□□□ 0.68
SPAST-204ENST00000621856 ISG20L2Q9H9L3 353 aaKnown RBP19.29■□□□□ 0.68
SPAST-204ENST00000621856 TIMMDC1Q9NPL8 285 aa19.29■□□□□ 0.68
SPAST-204ENST00000621856 A0A1W2PQL4 384 aaPredicted RBP19.28■□□□□ 0.68
SPAST-204ENST00000621856 NPIPA5E9PKD4 350 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 LALBAP00709 142 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 TFP02787 698 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 OR2T7P0C7T2 308 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 SHC1P29353 583 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 HCCSP53701 268 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 ACSM1Q08AH1 577 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 C19orf57Q0VDD7 668 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 ZBTB46Q86UZ6 589 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 PM20D2Q8IYS1 436 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 OR2T27Q8NH04 317 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 UTP23Q9BRU9 249 aaKnown RBP19.28■□□□□ 0.68
SPAST-204ENST00000621856 SYT4Q9H2B2 425 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 NPIPA1Q9UND3 350 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 SSR3Q9UNL2 185 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 B3GALT5Q9Y2C3 310 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 HDGFL3Q9Y3E1 203 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 NOX1Q9Y5S8 564 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 MT-ND5P03915 603 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 LIPCP11150 499 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 HLA-DOBP13765 273 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 CD96P40200 585 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 SERPINB10P48595 397 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 GPR85P60893 370 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 ATP1A1-AS1Q5TC04 95 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 LINC01590Q5TEZ4 76 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 LYPD4Q6UWN0 246 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 TMPRSS7Q7RTY8 843 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 VASH2Q86V25 355 aa19.28■□□□□ 0.68
SPAST-204ENST00000621856 OR2M5A3KFT3 312 aa19.27■□□□□ 0.68
SPAST-204ENST00000621856 PRSS37A4D1T9 235 aa19.27■□□□□ 0.68
SPAST-204ENST00000621856 PROB1E7EW31 1015 aa19.27■□□□□ 0.68
SPAST-204ENST00000621856 J3QLW9 94 aa19.27■□□□□ 0.68
SPAST-204ENST00000621856 ZIC3O60481 467 aa19.27■□□□□ 0.68
SPAST-204ENST00000621856 CLPXO76031 633 aa19.27■□□□□ 0.68
SPAST-204ENST00000621856 ZNF19P17023 458 aa19.27■□□□□ 0.68
SPAST-204ENST00000621856 CNR1P21554 472 aa19.27■□□□□ 0.68
SPAST-204ENST00000621856 CRYBB2P43320 205 aa19.27■□□□□ 0.68
SPAST-204ENST00000621856 DAP3P51398 398 aaKnown RBP19.27■□□□□ 0.68
SPAST-204ENST00000621856 RPS25P62851 125 aaKnown RBP19.27■□□□□ 0.68
SPAST-204ENST00000621856 TUBA1BP68363 451 aa19.27■□□□□ 0.68
SPAST-204ENST00000621856 GDPGP1Q6ZNW5 385 aa19.27■□□□□ 0.68
SPAST-204ENST00000621856 TUBA1AQ71U36 451 aa19.27■□□□□ 0.68
SPAST-204ENST00000621856 OR6V1Q8N148 313 aa19.27■□□□□ 0.68
SPAST-204ENST00000621856 TBC1D15Q8TC07 691 aa19.27■□□□□ 0.68
SPAST-204ENST00000621856 TMEM203Q969S6 136 aa19.27■□□□□ 0.68
SPAST-204ENST00000621856 SNX18Q96RF0 628 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms