RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 SBF2Q86WG5 1849 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 WNK3Q9BYP7 1800 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 SPTY2D1-AS1A0A0U1RR47 76 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 FAM183AA6NL82 134 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 OLFM2O95897 454 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 CRYBA1P05813 215 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 NPPBP16860 134 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 EDDM3AQ14507 147 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 ACSM3Q53FZ2 586 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 COX15Q7KZN9 410 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 CA5BP1Q8WTZ4 195 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 DCLRE1CQ96SD1 692 aaKnown RBP9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 CPPED1Q9BRF8 314 aaPredicted RBP9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 BARHL1Q9BZE3 327 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 CITO14578 2027 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 NUMA1Q14980 2115 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 A0A1B0GWA3 101 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 CLDN24A6NM45 220 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 HSPB6O14558 160 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 MT-ATP6P00846 226 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 NFYBP25208 207 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 PCSK6P29122 969 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 RPS18P62269 152 aaKnown RBP9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 NLRC3Q7RTR2 1065 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 COMMD7Q86VX2 200 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 TMEM185AQ8NFB2 350 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 B3GNT7Q8NFL0 401 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 OR11G2Q8NGC1 345 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 QRSL1Q9H0R6 528 aaKnown RBP9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 GLIPR2Q9H4G4 154 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 LUZP4Q9P127 313 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 DAPP1Q9UN19 280 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 MICAL3Q7RTP6 2002 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 MYH4Q9Y623 1939 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 MDFIC2A0A1B0GVS7 189 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 MEIOCA2RUB1 952 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 LGALS8O00214 317 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 ABCD4O14678 606 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 ACOT8O14734 319 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 BET1O15155 118 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 KCNK2O95069 426 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 CNIH1O95406 144 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 IFNA4P05014 189 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 ALPLP05186 524 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 CSF1P09603 554 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 CAMLGP49069 296 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 IDH3GP51553 393 aaPredicted RBP9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 RAB4BP61018 213 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 NHSL2Q5HYW2 709 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 AADACL3Q5VUY0 350 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 MFSD12Q6NUT3 480 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 OR5T1Q8NG75 326 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 CCL4L1Q8NHW4 92 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 ZFAND1Q8TCF1 268 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 LINC01599Q8WXQ3 324 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 SGK3Q96BR1 496 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 C3orf30Q96M34 536 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 NKX3-1Q99801 234 aaPredicted RBP9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 MMP28Q9H239 520 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 OR51E2Q9H255 320 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 NT5DC2Q9H857 520 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 FBXO7Q9Y3I1 522 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 LRP5O75197 1615 aa9.02□□□□□ -0.96
CLTCL1-211ENST00000621271 SEC14L2O76054 403 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 APOC3P02656 99 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 FURINP09958 794 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 DEFA4P12838 97 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 CCR2P41597 374 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 GFERP55789 205 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 TSPAN31Q12999 210 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 IHHQ14623 411 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 TRNP1Q6NT89 227 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 MAVSQ7Z434 540 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 DNAJC22Q8N4W6 341 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 OR13C9Q8NGT0 318 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 FNDC9Q8TBE3 224 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 TMEM163Q8TC26 289 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 KHSRPQ92945 711 aaKnown RBP eCLIP9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 MIB2Q96AX9 1013 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 ALG12Q9BV10 488 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 PRELID3BQ9Y3B1 194 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 V9GY05 133 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 SLC22A20A6NK97 555 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 AKR7A3O95154 331 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 IFNA10P01566 189 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 ZGLP1P0C6A0 271 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 CD22P20273 847 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 CD79BP40259 229 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 TGM4P49221 684 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 RPL11P62913 178 aaKnown RBP9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 FAM217AQ8IXS0 508 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 RDH10Q8IZV5 341 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 PARP16Q8N5Y8 322 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 OR8J2Q8NGG1 315 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 SLC38A5Q8WUX1 472 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 INTS12Q96CB8 462 aaKnown RBP9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 SULT4A1Q9BR01 284 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 GON7Q9BXV9 100 aa9.02□□□□□ -0.97
CLTCL1-211ENST00000621271 CHRNA9Q9UGM1 479 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms