RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 ZNF416Q9BWM5 594 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 ACTR6Q9GZN1 396 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF700Q9H0M5 742 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 ATG5Q9H1Y0 275 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 OR52A5Q9H2C5 316 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 PRSS16Q9NQE7 514 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 PIPOXQ9P0Z9 390 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 CAMK2AQ9UQM7 478 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 MPDZO75970 2070 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 A0A1B0GV50 99 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 METTL21EPA6NDL7 271 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 MFSD2BA6NFX1 497 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 SLC22A31A6NKX4 558 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 KCNAB3O43448 404 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 SUSD5O60279 629 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 LDB3O75112 727 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 SRMP19623 302 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 ZP3P21754 424 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 RBM34P42696 430 aaKnown RBP6.39□□□□□ -1.39
NEDD9-216ENST00000620854 H2BFSP57053 126 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 SEC61A1P61619 476 aaKnown RBP6.39□□□□□ -1.39
NEDD9-216ENST00000620854 PLA2G7Q13093 441 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 ELOCQ15369 112 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 OR1Q1Q15612 314 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 DUSP5Q16690 384 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 DECR1Q16698 335 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 PCGF3Q3KNV8 242 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 MRPL2Q5T653 305 aaKnown RBP6.39□□□□□ -1.39
NEDD9-216ENST00000620854 RGS7BPQ6MZT1 257 aaPredicted RBP6.39□□□□□ -1.39
NEDD9-216ENST00000620854 PDZD9Q8IXQ8 264 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 OR5T3Q8NGG3 340 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 OR2AJ1Q8NGZ0 328 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 SMIM4Q8WVI0 70 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 PELI1Q96FA3 418 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 SEC22AQ96IW7 307 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 TSSK2Q96PF2 358 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 PHF7Q9BWX1 381 aaPredicted RBP6.39□□□□□ -1.39
NEDD9-216ENST00000620854 PRRG4Q9BZD6 226 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF350Q9GZX5 532 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 SHARPINQ9H0F6 387 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 KCNK15Q9H427 330 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 ZMAT3Q9HA38 289 aaKnown RBP6.39□□□□□ -1.39
NEDD9-216ENST00000620854 BCL2L10Q9HD36 194 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 THAP10Q9P2Z0 257 aaPredicted RBP6.39□□□□□ -1.39
NEDD9-216ENST00000620854 APOBEC3BQ9UH17 382 aaKnown RBP6.39□□□□□ -1.39
NEDD9-216ENST00000620854 KIF26AQ9ULI4 1882 aaPredicted RBP6.39□□□□□ -1.39
NEDD9-216ENST00000620854 CFAP54Q96N23 3096 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 IGKV1-8A0A0C4DH67 115 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 PLSCR5A0PG75 271 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 GXYLT2A0PJZ3 443 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 OR5K4A6NMS3 321 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 C4orf47A7E2U8 309 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 PRKNO60260 465 aaPredicted RBP6.39□□□□□ -1.39
NEDD9-216ENST00000620854 SELENOFO60613 162 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 CYB5AP00167 134 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 HCKP08631 526 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 THEGLP0DJG4 465 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 CDK2P24941 298 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 SIRPAP78324 504 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 SHC2P98077 582 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 ALG10BQ5I7T1 473 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 GSG1LQ6UXU4 331 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF836Q6ZNA1 936 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 ASPGQ86U10 573 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 TPRA1Q86W33 373 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 LRRC25Q8N386 305 aaPredicted RBP6.39□□□□□ -1.39
NEDD9-216ENST00000620854 TSACCQ96A04 125 aaPredicted RBP6.39□□□□□ -1.39
NEDD9-216ENST00000620854 LRRC46Q96FV0 321 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 CHST6Q9GZX3 395 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 MFFQ9GZY8 342 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 ADGRL4Q9HBW9 690 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 SLC6A20Q9NP91 592 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 ALKBH4Q9NXW9 302 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 KLHL9Q9P2J3 617 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 SUSD2Q9UGT4 822 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF443Q9Y2A4 671 aaPredicted RBP6.39□□□□□ -1.39
NEDD9-216ENST00000620854 PCDHGA9Q9Y5G4 932 aaKnown RBP6.39□□□□□ -1.39
NEDD9-216ENST00000620854 AUP1Q9Y679 476 aa6.39□□□□□ -1.39
NEDD9-216ENST00000620854 TEX13DA0A0J9YY54 714 aaPredicted RBP6.38□□□□□ -1.39
NEDD9-216ENST00000620854 OR2W5A6NFC9 320 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF705EA8MWA4 302 aaPredicted RBP6.38□□□□□ -1.39
NEDD9-216ENST00000620854 DISC1C4P0D8 188 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 EEF1E1-BLOC1S5C9J1V9 151 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 AHSA1O95433 338 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 HTR2AP28223 471 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 HSD11B1P28845 292 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 P2RY2P41231 377 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 GUCA2AQ02747 115 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 HYAL1Q12794 435 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 ETFDHQ16134 617 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 CLVS2Q5SYC1 327 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 OR2L8Q8NGY9 312 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 DUSP19Q8WTR2 217 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 ZNRF4Q8WWF5 429 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 KISS1RQ969F8 398 aaPredicted RBP6.38□□□□□ -1.39
NEDD9-216ENST00000620854 ARRDC3Q96B67 414 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 NMNAT3Q96T66 252 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 TSNAXQ99598 290 aaKnown RBP6.38□□□□□ -1.39
NEDD9-216ENST00000620854 C19orf43Q9BQ61 176 aa6.38□□□□□ -1.39
NEDD9-216ENST00000620854 ULBP3Q9BZM4 244 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms