RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 PODNL1Q6PEZ8 512 aa16.1■□□□□ 0.17
LITAF-220ENST00000620789 TMEM200AQ86VY9 491 aa16.1■□□□□ 0.17
LITAF-220ENST00000620789 TMEM123Q8N131 208 aa16.1■□□□□ 0.17
LITAF-220ENST00000620789 TXNDC15Q96J42 360 aa16.1■□□□□ 0.17
LITAF-220ENST00000620789 ALKBH3Q96Q83 286 aaPredicted RBP16.1■□□□□ 0.17
LITAF-220ENST00000620789 ZNF347Q96SE7 839 aa16.1■□□□□ 0.17
LITAF-220ENST00000620789 EMC6Q9BV81 110 aa16.1■□□□□ 0.17
LITAF-220ENST00000620789 TRIM15Q9C019 465 aa16.1■□□□□ 0.17
LITAF-220ENST00000620789 RASSF1Q9NS23 344 aa16.1■□□□□ 0.17
LITAF-220ENST00000620789 HRNRQ86YZ3 2850 aaPredicted RBP16.1■□□□□ 0.17
LITAF-220ENST00000620789 CACNA1DQ01668 2161 aa16.09■□□□□ 0.17
LITAF-220ENST00000620789 CIB4A0PJX0 185 aa16.09■□□□□ 0.17
LITAF-220ENST00000620789 SLC35F4A4IF30 521 aa16.09■□□□□ 0.17
LITAF-220ENST00000620789 ZNF587BE7ETH6 402 aa16.09■□□□□ 0.17
LITAF-220ENST00000620789 UPK3AO75631 287 aa16.09■□□□□ 0.17
LITAF-220ENST00000620789 RAD51DO75771 328 aa16.09■□□□□ 0.17
LITAF-220ENST00000620789 GADD45GO95257 159 aa16.09■□□□□ 0.17
LITAF-220ENST00000620789 SAGP10523 405 aaPredicted RBP16.09■□□□□ 0.17
LITAF-220ENST00000620789 IFNGR1P15260 489 aa16.09■□□□□ 0.17
LITAF-220ENST00000620789 MPGP29372 298 aa16.09■□□□□ 0.17
LITAF-220ENST00000620789 MAGEA2P43356 314 aa16.09■□□□□ 0.17
LITAF-220ENST00000620789 TAB1Q15750 504 aa16.09■□□□□ 0.17
LITAF-220ENST00000620789 C9orf135Q5VTT2 229 aa16.09■□□□□ 0.17
LITAF-220ENST00000620789 SLC35D2Q76EJ3 337 aa16.09■□□□□ 0.17
LITAF-220ENST00000620789 CDK20Q8IZL9 346 aa16.09■□□□□ 0.17
LITAF-220ENST00000620789 OR52J3Q8NH60 311 aa16.09■□□□□ 0.17
LITAF-220ENST00000620789 HSD17B8Q92506 261 aa16.09■□□□□ 0.17
LITAF-220ENST00000620789 FUZQ9BT04 418 aa16.09■□□□□ 0.17
LITAF-220ENST00000620789 TMEM5Q9Y2B1 443 aa16.09■□□□□ 0.17
LITAF-220ENST00000620789 HIF3AQ9Y2N7 669 aa16.09■□□□□ 0.17
LITAF-220ENST00000620789 NOTCH2Q04721 2471 aa16.08■□□□□ 0.17
LITAF-220ENST00000620789 OR5H1A6NKK0 313 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 AQP12BA6NM10 295 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 ZNF726A6NNF4 738 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 EFCAB9A8MZ26 197 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 RRM2P31350 389 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 AQP2P41181 271 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 GPR4P46093 362 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 SLC9A3P48764 834 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 BIDP55957 195 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 KRTAP10-9P60411 292 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 RPS4XP62701 263 aaKnown RBP16.08■□□□□ 0.16
LITAF-220ENST00000620789 TGFBR3Q03167 851 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 CHRNB3Q05901 458 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 FLOT2Q14254 428 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 SEC23BQ15437 767 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 STK11Q15831 433 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 GABRA6Q16445 453 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 FAM98BQ52LJ0 330 aaKnown RBP16.08■□□□□ 0.16
LITAF-220ENST00000620789 TIMM23BQ5SRD1 257 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 OR7E24Q6IFN5 339 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 TMPRSS11FQ6ZWK6 438 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 LINGO2Q7L985 606 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 P2RY8Q86VZ1 359 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 MEX3DQ86XN8 651 aaKnown RBP16.08■□□□□ 0.16
LITAF-220ENST00000620789 WDFY1Q8IWB7 410 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 AQP12AQ8IXF9 295 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 GPR137CQ8N3F9 429 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 C1orf162Q8NEQ5 155 aaPredicted RBP16.08■□□□□ 0.16
LITAF-220ENST00000620789 OR4K5Q8NGD3 323 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 MOSPD2Q8NHP6 518 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 ADAD1Q96M93 576 aaKnown RBP16.08■□□□□ 0.16
LITAF-220ENST00000620789 MUS81Q96NY9 551 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 POMPQ9Y244 141 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 LRBAP50851 2863 aa16.08■□□□□ 0.16
LITAF-220ENST00000620789 DEFB108AA8MXU0 73 aa16.07■□□□□ 0.16
LITAF-220ENST00000620789 RPL36A-HNRNPH2H7BZ11 118 aa16.07■□□□□ 0.16
LITAF-220ENST00000620789 SIAH2O43255 324 aa16.07■□□□□ 0.16
LITAF-220ENST00000620789 HRGP04196 525 aa16.07■□□□□ 0.16
LITAF-220ENST00000620789 F13BP05160 661 aa16.07■□□□□ 0.16
LITAF-220ENST00000620789 ROR2Q01974 943 aaKnown RBP16.07■□□□□ 0.16
LITAF-220ENST00000620789 CAMK2DQ13557 499 aa16.07■□□□□ 0.16
LITAF-220ENST00000620789 LAPTM4AQ15012 233 aa16.07■□□□□ 0.16
LITAF-220ENST00000620789 ANKDD1AQ495B1 522 aa16.07■□□□□ 0.16
LITAF-220ENST00000620789 CARD17Q5XLA6 110 aa16.07■□□□□ 0.16
LITAF-220ENST00000620789 FBXW10Q5XX13 1052 aa16.07■□□□□ 0.16
LITAF-220ENST00000620789 OAFQ86UD1 273 aa16.07■□□□□ 0.16
LITAF-220ENST00000620789 WFDC8Q8IUA0 241 aa16.07■□□□□ 0.16
LITAF-220ENST00000620789 C20orf196Q8IYI0 205 aa16.07■□□□□ 0.16
LITAF-220ENST00000620789 OR6X1Q8NH79 312 aa16.07■□□□□ 0.16
LITAF-220ENST00000620789 FAM46AQ96IP4 442 aaKnown RBP16.07■□□□□ 0.16
LITAF-220ENST00000620789 LRR1Q96L50 414 aa16.07■□□□□ 0.16
LITAF-220ENST00000620789 POLDIP3Q9BY77 421 aaKnown RBP16.07■□□□□ 0.16
LITAF-220ENST00000620789 LRMDAQ9H2I8 198 aa16.07■□□□□ 0.16
LITAF-220ENST00000620789 CLEC4MQ9H2X3 399 aaPredicted RBP16.07■□□□□ 0.16
LITAF-220ENST00000620789 KRCC1Q9NPI7 259 aaPredicted RBP16.07■□□□□ 0.16
LITAF-220ENST00000620789 INIPQ9NRY2 104 aa16.07■□□□□ 0.16
LITAF-220ENST00000620789 SLC7A8Q9UHI5 535 aa16.07■□□□□ 0.16
LITAF-220ENST00000620789 TRAV27A0A087WT01 109 aa16.06■□□□□ 0.16
LITAF-220ENST00000620789 A0A1W2PRG6 482 aa16.06■□□□□ 0.16
LITAF-220ENST00000620789 SH3PXD2BA1X283 911 aa16.06■□□□□ 0.16
LITAF-220ENST00000620789 CDC42EP2O14613 210 aa16.06■□□□□ 0.16
LITAF-220ENST00000620789 CLOCKO15516 846 aa16.06■□□□□ 0.16
LITAF-220ENST00000620789 KLF4O43474 513 aa16.06■□□□□ 0.16
LITAF-220ENST00000620789 BCL10O95999 233 aa16.06■□□□□ 0.16
LITAF-220ENST00000620789 RAP2AP10114 183 aa16.06■□□□□ 0.16
LITAF-220ENST00000620789 OMPP47874 163 aa16.06■□□□□ 0.16
LITAF-220ENST00000620789 CBX1P83916 185 aa16.06■□□□□ 0.16
LITAF-220ENST00000620789 FHL1Q13642 323 aa16.06■□□□□ 0.16
LITAF-220ENST00000620789 MELKQ14680 651 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms