RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 MORN4Q8NDC4 146 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 SGK3Q96BR1 496 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 MED18Q9BUE0 208 aa10.49□□□□□ -0.73
CLIP1-219ENST00000620786 FIGNL2A6NMB9 653 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 C4orf47A7E2U8 309 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 NCR1O76036 304 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 MT-ATP6P00846 226 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 MT-ND4P03905 459 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 NDUFB7P17568 137 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 CLDN6P56747 220 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 GRB2P62993 217 aaKnown RBP10.48□□□□□ -0.73
CLIP1-219ENST00000620786 CXADRP78310 365 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 C6orf183Q5T699 404 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 DEFB124Q8NES8 71 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 ADAMTS14Q8WXS8 1223 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 COQ10AQ96MF6 247 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 UBL7Q96S82 380 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-219ENST00000620786 TMEM59Q9BXS4 323 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 DAPP1Q9UN19 280 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 METTL12A8MUP2 240 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 GABRPO00591 440 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 SEC14L2O76054 403 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 MAKP20794 623 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 TAS2R19P59542 299 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 IL13RA1P78552 427 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 OR8G1Q15617 311 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 GFRALQ6UXV0 394 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 BHLHE23Q8NDY6 225 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 GGHQ92820 318 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 EMG1Q92979 244 aaKnown RBP10.48□□□□□ -0.73
CLIP1-219ENST00000620786 RASD2Q96D21 266 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 GIMAP5Q96F15 307 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 SLC29A1Q99808 456 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 NDUFAF4Q9P032 175 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 YBX2Q9Y2T7 364 aaKnown RBP10.48□□□□□ -0.73
CLIP1-219ENST00000620786 R4GN57 208 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 CACNA1SQ13698 1873 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 CDHR4A6H8M9 788 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 FANCGO15287 622 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 ADAM23O75077 832 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 NSA2O95478 260 aaKnown RBP10.48□□□□□ -0.73
CLIP1-219ENST00000620786 OLFM2O95897 454 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 EVI2BP34910 448 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 CA5AP35218 305 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 SLC19A1P41440 591 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 LUMP51884 338 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-219ENST00000620786 TRMT12Q53H54 448 aaKnown RBP10.48□□□□□ -0.73
CLIP1-219ENST00000620786 OLIG3Q7RTU3 272 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 ZNF679Q8IYX0 411 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 GTPBP8Q8N3Z3 284 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-219ENST00000620786 GJC3Q8NFK1 279 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 HRASLS5Q96KN8 279 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 BCL7BQ9BQE9 202 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 HES7Q9BYE0 225 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 NIPAL2Q9H841 368 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 RPH3ALQ9UNE2 315 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 A0A1W2PPV4 95 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 H0YIG0 161 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 FZD7O75084 574 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 TFP02787 698 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 SERPINA7P05543 415 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 GM2AP17900 193 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 GNB2P62879 340 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 FOXK2Q01167 660 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 AGBL4Q5VU57 503 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 ANKRD13BQ86YJ7 626 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 SLC16A11Q8NCK7 471 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 TFAP2CQ92754 450 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 IER2Q9BTL4 223 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 SEMA4CQ9C0C4 833 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 USP22Q9UPT9 525 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 CITO14578 2027 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 A6NIN4 97 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 ZNF891A8MT65 544 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-219ENST00000620786 GPR137BO60478 399 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 KCNK2O95069 426 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 TSPAN15O95858 294 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 PGFP49763 221 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 NFATC3Q12968 1075 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 GLYR1Q49A26 553 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-219ENST00000620786 DCXRQ7Z4W1 244 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 CA13Q8N1Q1 262 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 OR4M1Q8NGD0 313 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 PFN4Q8NHR9 129 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 TSLPQ969D9 159 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 PIGTQ969N2 578 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 AP1S3Q96PC3 154 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 SLC25A31Q9H0C2 315 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 NOX4Q9NPH5 578 aa10.48□□□□□ -0.73
CLIP1-219ENST00000620786 OR2T7P0C7T2 308 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 ALDH3B2P48448 385 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 TGM4P49221 684 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 GFERP55789 205 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 OR2T27Q8NH04 317 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 RAB3CQ96E17 227 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 TCRBV3S1A0A5B6 114 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 ACOD1A6NK06 481 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 SOCS6O14544 535 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 SPINT2O43291 252 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 UBCP0CG48 685 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms