RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 COPZ1P61923 177 aa14.32□□□□□ -0.12
CD40-207ENST00000620709 C1orf94Q6P1W5 598 aa14.32□□□□□ -0.12
CD40-207ENST00000620709 KLHL17Q6TDP4 642 aa14.32□□□□□ -0.12
CD40-207ENST00000620709 Q71RC1 249 aaPredicted RBP14.32□□□□□ -0.12
CD40-207ENST00000620709 SETD9Q8NE22 299 aa14.32□□□□□ -0.12
CD40-207ENST00000620709 PIGXQ8TBF5 258 aa14.32□□□□□ -0.12
CD40-207ENST00000620709 ADGRG7Q96K78 797 aa14.32□□□□□ -0.12
CD40-207ENST00000620709 HS3ST6Q96QI5 342 aa14.32□□□□□ -0.12
CD40-207ENST00000620709 CCL19Q99731 98 aa14.32□□□□□ -0.12
CD40-207ENST00000620709 PLSCR4Q9NRQ2 329 aa14.32□□□□□ -0.12
CD40-207ENST00000620709 SELENONQ9NZV5 590 aa14.32□□□□□ -0.12
CD40-207ENST00000620709 ARHGEF9O43307 516 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 EIF4E2O60573 245 aaKnown RBP14.31□□□□□ -0.12
CD40-207ENST00000620709 LYPD3O95274 346 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 LYNP07948 512 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 LINGO3P0C6S8 592 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 GSTM3P21266 225 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 SHC1P29353 583 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 HOXC12P31275 282 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 RYKP34925 604 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 EIF1P41567 113 aaKnown RBP14.31□□□□□ -0.12
CD40-207ENST00000620709 PCYT1AP49585 367 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 ESRRGP62508 458 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 COX10Q12887 443 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 ACKR1Q16570 336 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 SWT1Q5T5J6 900 aaKnown RBP14.31□□□□□ -0.12
CD40-207ENST00000620709 GTF2IRD2BQ6EKJ0 949 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 CBLN3Q6UW01 205 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 CD300LDQ6UXZ3 194 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 C22orf34Q6ZV56 151 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 MBOAT2Q6ZWT7 520 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 ZER1Q7Z7L7 766 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 GTF2IRD2Q86UP8 949 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 WFDC8Q8IUA0 241 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 CADM2Q8N3J6 435 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 RNF217Q8TC41 542 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 GNPDA2Q8TDQ7 276 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 TMEM255BQ8WV15 326 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 DNAJA4Q8WW22 397 aaPredicted RBP14.31□□□□□ -0.12
CD40-207ENST00000620709 MPP4Q96JB8 637 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 MUS81Q96NY9 551 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 PITX2Q99697 317 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 SMR3AQ99954 134 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 PRSS27Q9BQR3 290 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 FANCFQ9NPI8 374 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 DLL4Q9NR61 685 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 GMPPBQ9Y5P6 360 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 TNFAIP8O95379 198 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 FOSL1P15407 271 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 P2RX1P51575 399 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 TOMM34Q15785 309 aaPredicted RBP14.31□□□□□ -0.12
CD40-207ENST00000620709 ALG10BQ5I7T1 473 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 Q5PR19 223 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 ZNF691Q5VV52 312 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 ULK3Q6PHR2 472 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 THAP5Q7Z6K1 395 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 CXorf67Q86X51 503 aaPredicted RBP14.31□□□□□ -0.12
CD40-207ENST00000620709 RNF113BQ8IZP6 322 aaKnown RBP14.31□□□□□ -0.12
CD40-207ENST00000620709 TMEM239Q8WW34 195 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 PIGTQ969N2 578 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 ARSGQ96EG1 525 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 PERPQ96FX8 193 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 POM121Q96HA1 1249 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 HS6ST2Q96MM7 605 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 APOL4Q9BPW4 351 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 TIGARQ9NQ88 270 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 GLRX2Q9NS18 164 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 NDRG4Q9ULP0 352 aaKnown RBP14.31□□□□□ -0.12
CD40-207ENST00000620709 PCDHGB5Q9Y5G0 923 aa14.31□□□□□ -0.12
CD40-207ENST00000620709 E9PQ18 207 aa14.3□□□□□ -0.12
CD40-207ENST00000620709 NTN1O95631 604 aa14.3□□□□□ -0.12
CD40-207ENST00000620709 OSMP13725 252 aa14.3□□□□□ -0.12
CD40-207ENST00000620709 AGTR1P30556 359 aa14.3□□□□□ -0.12
CD40-207ENST00000620709 RBM34P42696 430 aaKnown RBP14.3□□□□□ -0.12
CD40-207ENST00000620709 MYBPC1Q00872 1141 aa14.3□□□□□ -0.12
CD40-207ENST00000620709 TMEM176BQ3YBM2 270 aaPredicted RBP14.3□□□□□ -0.12
CD40-207ENST00000620709 TMEM201Q5SNT2 666 aa14.3□□□□□ -0.12
CD40-207ENST00000620709 SHEQ5VZ18 495 aa14.3□□□□□ -0.12
CD40-207ENST00000620709 WBP2NLQ6ICG8 309 aa14.3□□□□□ -0.12
CD40-207ENST00000620709 WDR88Q6ZMY6 472 aa14.3□□□□□ -0.12
CD40-207ENST00000620709 BEND4Q6ZU67 534 aa14.3□□□□□ -0.12
CD40-207ENST00000620709 NRMQ8IXM6 262 aa14.3□□□□□ -0.12
CD40-207ENST00000620709 ABHD3Q8WU67 409 aa14.3□□□□□ -0.12
CD40-207ENST00000620709 C18orf12Q96KH6 178 aa14.3□□□□□ -0.12
CD40-207ENST00000620709 HRASLS5Q96KN8 279 aa14.3□□□□□ -0.12
CD40-207ENST00000620709 SRXN1Q9BYN0 137 aa14.3□□□□□ -0.12
CD40-207ENST00000620709 ACTR6Q9GZN1 396 aa14.3□□□□□ -0.12
CD40-207ENST00000620709 HSPE1-MOB4S4R3N1 261 aa14.3□□□□□ -0.12
CD40-207ENST00000620709 GJE1A6NN92 205 aa14.29□□□□□ -0.12
CD40-207ENST00000620709 EFNA2O43921 213 aa14.29□□□□□ -0.12
CD40-207ENST00000620709 THBDP07204 575 aa14.29□□□□□ -0.12
CD40-207ENST00000620709 EPHA2P29317 976 aa14.29□□□□□ -0.12
CD40-207ENST00000620709 OMPP47874 163 aa14.29□□□□□ -0.12
CD40-207ENST00000620709 CRISP1P54107 249 aa14.29□□□□□ -0.12
CD40-207ENST00000620709 LSM11P83369 360 aaKnown RBP eCLIP14.29□□□□□ -0.12
CD40-207ENST00000620709 TSPAN31Q12999 210 aa14.29□□□□□ -0.12
CD40-207ENST00000620709 ZNF239Q16600 458 aaKnown RBP14.29□□□□□ -0.12
CD40-207ENST00000620709 TTC33Q6PID6 262 aaPredicted RBP14.29□□□□□ -0.12
CD40-207ENST00000620709 STAC2Q6ZMT1 411 aa14.29□□□□□ -0.12
CD40-207ENST00000620709 KRTAP1-3Q8IUG1 177 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms