RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 FOXG1P55316 489 aaPredicted RBP12.08□□□□□ -0.48
NEK3-210ENST00000620675 ERVK-25P63136 954 aa12.08□□□□□ -0.48
NEK3-210ENST00000620675 ZP4Q12836 540 aa12.08□□□□□ -0.48
NEK3-210ENST00000620675 TOP3AQ13472 1001 aaPredicted RBP12.08□□□□□ -0.48
NEK3-210ENST00000620675 HSPB2Q16082 182 aa12.08□□□□□ -0.48
NEK3-210ENST00000620675 ALG10Q5BKT4 473 aa12.08□□□□□ -0.48
NEK3-210ENST00000620675 CLEC12AQ5QGZ9 265 aa12.08□□□□□ -0.48
NEK3-210ENST00000620675 ZNF620Q6ZNG0 422 aa12.08□□□□□ -0.48
NEK3-210ENST00000620675 PXKQ7Z7A4 578 aa12.08□□□□□ -0.48
NEK3-210ENST00000620675 LUZP2Q86TE4 346 aa12.08□□□□□ -0.48
NEK3-210ENST00000620675 UEVLDQ8IX04 471 aa12.08□□□□□ -0.48
NEK3-210ENST00000620675 CLDN22Q8N7P3 220 aa12.08□□□□□ -0.48
NEK3-210ENST00000620675 ZNF610Q8N9Z0 462 aa12.08□□□□□ -0.48
NEK3-210ENST00000620675 SF3B5Q9BWJ5 86 aaKnown RBP12.08□□□□□ -0.48
NEK3-210ENST00000620675 OR52D1Q9H346 318 aa12.08□□□□□ -0.48
NEK3-210ENST00000620675 FANCFQ9NPI8 374 aa12.08□□□□□ -0.48
NEK3-210ENST00000620675 NOSIPQ9Y314 301 aaKnown RBP12.08□□□□□ -0.48
NEK3-210ENST00000620675 LRBAP50851 2863 aa12.08□□□□□ -0.48
NEK3-210ENST00000620675 TACC2O95359 2948 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 SLC35F4A4IF30 521 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 ZNF724A8MTY0 619 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 SOCS2O14508 198 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 ZNF432O94892 652 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 VAMP5O95183 116 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 GRNP28799 593 aaKnown RBP12.07□□□□□ -0.48
NEK3-210ENST00000620675 CTXN1P60606 82 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 C1DQ13901 141 aaKnown RBP12.07□□□□□ -0.48
NEK3-210ENST00000620675 PDK3Q15120 406 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 ACKR1Q16570 336 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 TMEM201Q5SNT2 666 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 CARD17Q5XLA6 110 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 GTF2IRD2BQ6EKJ0 949 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 FAHD1Q6P587 224 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 SLC35D2Q76EJ3 337 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 GALNT5Q7Z7M9 940 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 GTF2IRD2Q86UP8 949 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 ATG16L2Q8NAA4 619 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 FANK1Q8TC84 345 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 TSPAN32Q96QS1 320 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 SLC29A1Q99808 456 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 KATNB1Q9BVA0 655 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 INIPQ9NRY2 104 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 TMEFF2Q9UIK5 374 aaPredicted RBP12.07□□□□□ -0.48
NEK3-210ENST00000620675 MGAT4BQ9UQ53 548 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 ROS1P08922 2347 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 LOC102725191A0A1B0GVB3 256 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 CLEC18AA5D8T8 446 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 ARRDC5A6NEK1 342 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 EEF1E1-BLOC1S5C9J1V9 151 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 EEF1E1O43324 174 aaKnown RBP12.07□□□□□ -0.48
NEK3-210ENST00000620675 AGFG2O95081 481 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 EPHA2P29317 976 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 IFNGR2P38484 337 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 BIDP55957 195 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 CAMK2DQ13557 499 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 SLC36A3Q495N2 470 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 PHYHD1Q5SRE7 291 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 NIPAL3Q6P499 406 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 ZNF474Q6S9Z5 364 aaPredicted RBP12.07□□□□□ -0.48
NEK3-210ENST00000620675 CLEC18BQ6UXF7 455 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 CASP12Q6UXS9 341 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 TFAP2EQ6VUC0 442 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 LINGO2Q7L985 606 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 ZDHHC13Q8IUH4 622 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 CLEC18CQ8NCF0 446 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 NRBF2Q96F24 287 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 ZFP3Q96NJ6 502 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 SFXN3Q9BWM7 321 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 EMC9Q9Y3B6 208 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 RRP15Q9Y3B9 282 aaKnown RBP12.07□□□□□ -0.48
NEK3-210ENST00000620675 NOX1Q9Y5S8 564 aa12.07□□□□□ -0.48
NEK3-210ENST00000620675 HTR3EA5X5Y0 456 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 WIPF3A6NGB9 483 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 EI24O14681 340 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 PPP1R3DO95685 299 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 ADAP00813 363 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 CHRNB4P30926 498 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 LRRC36Q1X8D7 754 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 TSPO2Q5TGU0 170 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 LPCAT4Q643R3 524 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 SMARCD3Q6STE5 483 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 AAED1Q7RTV5 226 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 FAM122BQ7Z309 247 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 HIPK1Q86Z02 1210 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 C10orf67Q8IYJ2 551 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 CBR4Q8N4T8 237 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 LINC00471Q8N535 108 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 IQCF1Q8N6M8 205 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 ANKK1Q8NFD2 765 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 OR6K3Q8NGY3 331 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 RASD2Q96D21 266 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 Q96M85 177 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 OR2M2Q96R28 347 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 KRCC1Q9NPI7 259 aaPredicted RBP12.06□□□□□ -0.48
NEK3-210ENST00000620675 GLRX2Q9NS18 164 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 EMC3Q9P0I2 261 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 ZNF629Q9UEG4 869 aaPredicted RBP12.06□□□□□ -0.48
NEK3-210ENST00000620675 ZNF346Q9UL40 294 aaKnown RBP12.06□□□□□ -0.48
NEK3-210ENST00000620675 HEATR1Q9H583 2144 aaKnown RBP12.06□□□□□ -0.48
NEK3-210ENST00000620675 H0YHG0 523 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms