RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 POU3F1Q03052 451 aaPredicted RBP13.54□□□□□ -0.24
CBWD1-225ENST00000616944 OCLNQ16625 522 aa13.54□□□□□ -0.24
CBWD1-225ENST00000616944 SMN1Q16637 294 aaKnown RBP13.54□□□□□ -0.24
CBWD1-225ENST00000616944 PDSS1Q5T2R2 415 aa13.54□□□□□ -0.24
CBWD1-225ENST00000616944 ARMC4Q5T2S8 1044 aa13.54□□□□□ -0.24
CBWD1-225ENST00000616944 OXGR1Q96P68 337 aa13.54□□□□□ -0.24
CBWD1-225ENST00000616944 EXO5Q9H790 373 aa13.54□□□□□ -0.24
CBWD1-225ENST00000616944 PAQR5Q9NXK6 330 aaPredicted RBP13.54□□□□□ -0.24
CBWD1-225ENST00000616944 ZNF346Q9UL40 294 aaKnown RBP13.54□□□□□ -0.24
CBWD1-225ENST00000616944 RASD1Q9Y272 281 aa13.54□□□□□ -0.24
CBWD1-225ENST00000616944 FREM1Q5H8C1 2179 aa13.54□□□□□ -0.24
CBWD1-225ENST00000616944 RIIAD1A6NNX1 92 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 ZNF716A6NP11 495 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 KDM4EB2RXH2 506 aaPredicted RBP13.53□□□□□ -0.24
CBWD1-225ENST00000616944 SLC1A7O00341 560 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 ZNF3P17036 446 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 FMO3P31513 532 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 SRYQ05066 204 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 TOP3AQ13472 1001 aaPredicted RBP13.53□□□□□ -0.24
CBWD1-225ENST00000616944 KRR1Q13601 381 aaKnown RBP13.53□□□□□ -0.24
CBWD1-225ENST00000616944 CRMP1Q14194 572 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 SLC17A1Q14916 467 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 C3AR1Q16581 482 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 AADACL4Q5VUY2 407 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 TMEM225Q6GV28 225 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 FAM180AQ6UWF9 173 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 BCDIN3DQ7Z5W3 292 aaKnown RBP13.53□□□□□ -0.24
CBWD1-225ENST00000616944 ADGRE4PQ86SQ3 457 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 WDFY1Q8IWB7 410 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 ZNF786Q8N393 782 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 ARIH2OSQ8N7S6 290 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 NPEPL1Q8NDH3 523 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 OR4K13Q8NH42 304 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 ASB10Q8WXI3 467 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 ZHX1-C8orf76Q96EF9 292 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 LRR1Q96L50 414 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 GPR137Q96N19 417 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 NAA11Q9BSU3 229 aaPredicted RBP13.53□□□□□ -0.24
CBWD1-225ENST00000616944 HCAR1Q9BXC0 346 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 SLC25A18Q9H1K4 315 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 TIGARQ9NQ88 270 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 GRHPRQ9UBQ7 328 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 KLHL21Q9UJP4 597 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 SHANK1Q9Y566 2161 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 A0A1W2PRG6 482 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 OR14I1A6ND48 311 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 ENTPD6O75354 484 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 IFNGP01579 166 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 IFNGR1P15260 489 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 CRHBPP24387 322 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 CDKN2AP42771 156 aaKnown RBP13.53□□□□□ -0.24
CBWD1-225ENST00000616944 TDGF1P3P51864 188 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 RPS3AP61247 264 aaKnown RBP13.53□□□□□ -0.24
CBWD1-225ENST00000616944 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.53□□□□□ -0.24
CBWD1-225ENST00000616944 ITGADQ13349 1161 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 PCSK4Q6UW60 755 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 SLC35D2Q76EJ3 337 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 FGD2Q7Z6J4 655 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 GPAT4Q86UL3 456 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 CPOQ8IVL8 374 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 UEVLDQ8IX04 471 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 SLC37A3Q8NCC5 494 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 SDR9C7Q8NEX9 313 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 OR52E2Q8NGJ4 325 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 ZPLD1Q8TCW7 415 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 RNF128Q8TEB7 428 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 PTP4A1Q93096 173 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 PLEKHA8Q96JA3 519 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 SF3B5Q9BWJ5 86 aaKnown RBP13.53□□□□□ -0.24
CBWD1-225ENST00000616944 NMNAT2Q9BZQ4 307 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 PLCXD1Q9NUJ7 323 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 DNAJC27Q9NZQ0 273 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 ING1Q9UK53 422 aaPredicted RBP13.53□□□□□ -0.24
CBWD1-225ENST00000616944 ZFYVE26Q68DK2 2539 aa13.53□□□□□ -0.24
CBWD1-225ENST00000616944 A0A1B0GTH9 108 aa13.52□□□□□ -0.25
CBWD1-225ENST00000616944 SH3D21A4FU49 640 aa13.52□□□□□ -0.25
CBWD1-225ENST00000616944 FAM183AA6NL82 134 aa13.52□□□□□ -0.25
CBWD1-225ENST00000616944 CYTIPO60759 359 aa13.52□□□□□ -0.25
CBWD1-225ENST00000616944 SERPINI2O75830 405 aa13.52□□□□□ -0.25
CBWD1-225ENST00000616944 CCDC159P0C7I6 412 aa13.52□□□□□ -0.25
CBWD1-225ENST00000616944 SLC2A5P22732 501 aa13.52□□□□□ -0.25
CBWD1-225ENST00000616944 DAP3P51398 398 aaKnown RBP13.52□□□□□ -0.25
CBWD1-225ENST00000616944 SLC16A1P53985 500 aa13.52□□□□□ -0.25
CBWD1-225ENST00000616944 MELKQ14680 651 aa13.52□□□□□ -0.25
CBWD1-225ENST00000616944 RBM48Q5RL73 367 aaKnown RBP13.52□□□□□ -0.25
CBWD1-225ENST00000616944 MEDAGQ5VYS4 303 aa13.52□□□□□ -0.25
CBWD1-225ENST00000616944 NXNL2Q5VZ03 156 aa13.52□□□□□ -0.25
CBWD1-225ENST00000616944 FCRLAQ7L513 359 aa13.52□□□□□ -0.25
CBWD1-225ENST00000616944 CXXC5Q7LFL8 322 aaKnown RBP13.52□□□□□ -0.25
CBWD1-225ENST00000616944 ADCK1Q86TW2 530 aa13.52□□□□□ -0.25
CBWD1-225ENST00000616944 CYB561A3Q8NBI2 242 aa13.52□□□□□ -0.25
CBWD1-225ENST00000616944 OR9K2Q8NGE7 335 aa13.52□□□□□ -0.25
CBWD1-225ENST00000616944 SARAFQ96BY9 339 aa13.52□□□□□ -0.25
CBWD1-225ENST00000616944 TXNDC15Q96J42 360 aa13.52□□□□□ -0.25
CBWD1-225ENST00000616944 ZNF582Q96NG8 517 aaPredicted RBP13.52□□□□□ -0.25
CBWD1-225ENST00000616944 SNX18Q96RF0 628 aa13.52□□□□□ -0.25
CBWD1-225ENST00000616944 NMNAT3Q96T66 252 aa13.52□□□□□ -0.25
CBWD1-225ENST00000616944 SLX1AQ9BQ83 275 aa13.52□□□□□ -0.25
CBWD1-225ENST00000616944 TUBA1CQ9BQE3 449 aa13.52□□□□□ -0.25
CBWD1-225ENST00000616944 YTHDF1Q9BYJ9 559 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms