RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 NSA2O95478 260 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 NR2C1P13056 603 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 ALKBH1Q13686 389 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 RAB12Q6IQ22 244 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 IL17RDQ8NFM7 739 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 OR2A5Q96R48 311 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 POLE3Q9NRF9 147 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 B3GALT1Q9Y5Z6 326 aa8.18□□□□□ -1.1
PDLIM5-222ENST00000615540 HMX3A6NHT5 357 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 CREBL2O60519 120 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 PRH1P02810 166 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 LCATP04180 440 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 CD79BP40259 229 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 AGAP7PQ5VUJ5 663 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 AGAP6Q5VW22 663 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 THOC7Q6I9Y2 204 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 FAAP20Q6NZ36 180 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 DCXRQ7Z4W1 244 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 OR1J4Q8NGS1 313 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 SUN5Q8TC36 379 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 FCRL1Q96LA6 429 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 AGAP4Q96P64 663 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 ZMAT3Q9HA38 289 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 C5orf42Q9H799 3197 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 IGKV1-8A0A0C4DH67 115 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 GLCEO94923 617 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 TMEM225BP0DP42 221 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 LANCL3Q6ZV70 420 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 FTMTQ8N4E7 242 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 OR52N1Q8NH53 320 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 ZNF471Q9BX82 626 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 MMACHCQ9Y4U1 282 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 C4orf51C9J302 202 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 WRBO00258 174 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 NUDT21O43809 227 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 FOLR1P15328 257 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 POU4F3Q15319 338 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 COX15Q7KZN9 410 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 LRRC56Q8IYG6 542 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 CLDN22Q8N7P3 220 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 BOLLQ8N9W6 283 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 OR5D18Q8NGL1 313 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 COQ3Q9NZJ6 369 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 IGHG1P01857 330 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 HSD17B7P56937 341 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 FOXL2P58012 376 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 RPL18Q07020 188 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 SLC25A35Q3KQZ1 300 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 FAM205BPQ63HN1 556 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 C16orf47Q6ZP98 133 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 KIAA0907Q7Z7F0 614 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 ZNF611Q8N823 705 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 KTI12Q96EK9 354 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 ZNF587Q96SQ5 575 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 ATF6BQ99941 703 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 WFDC6Q9BQY6 131 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 SIAEQ9HAT2 523 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 FLRT3Q9NZU0 649 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 CGGBP1Q9UFW8 167 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 PCDHGB2Q9Y5G2 931 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 PCDHGA3Q9Y5H0 932 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 MYO7AQ13402 2215 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 A0A087WV62 115 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 ATP1B1P05026 303 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 SLC2A1P11166 492 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 PRSS3P35030 304 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 GDNFP39905 211 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 MNX1P50219 401 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 BAK1Q16611 211 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 DMRTC1Q5HYR2 192 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 SLC22A10Q63ZE4 541 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 SSX6Q7RTT6 188 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 TRAPPC6BQ86SZ2 158 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 COMMD7Q86VX2 200 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 DEFB123Q8N688 67 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 EDAQ92838 391 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 GCDHQ92947 438 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 EMC7Q9NPA0 242 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 MEMO1Q9Y316 297 aa8.17□□□□□ -1.1
PDLIM5-222ENST00000615540 A0A1W2PNR3 127 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 A0A1W2PQF6 199 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 KNG1P01042 644 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 SBK2P0C263 348 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 ATF4P18848 351 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 HTR2AP28223 471 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 VEGFCP49767 419 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 FXYD4P59646 89 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 SSX1Q16384 188 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 GARNL3Q5VVW2 1013 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 SYT13Q7L8C5 426 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 PRR18Q8N4B5 295 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 OR2I1PQ8NGU4 316 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 TSPAN10Q9H1Z9 355 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 CMC2Q9NRP2 79 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 B4GALT7Q9UBV7 327 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 LAMA2P24043 3122 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 FARS2O95363 451 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 AKAIN1P0CW23 69 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 POU3F3P20264 500 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 FCARP24071 287 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms