RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 TANKQ92844 425 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 RAB8BQ92930 207 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 PDLIM5Q96HC4 596 aaKnown RBP8.16□□□□□ -1.1
TTC28-208ENST00000612946 SMIM7Q9BQ49 75 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 ZNF552Q9H707 407 aaPredicted RBP8.16□□□□□ -1.1
TTC28-208ENST00000612946 BOLA1Q9Y3E2 137 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 MPDZO75970 2070 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 DDTLA6NHG4 134 aaPredicted RBP8.16□□□□□ -1.1
TTC28-208ENST00000612946 TXNDC12O95881 172 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 GCSHP23434 173 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 RAB28P51157 221 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 NCR3LG1Q68D85 454 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 BPIFCQ8NFQ6 507 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 URGCP-MRPS24S4R325 110 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 F2P00734 622 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 HOXA10P31260 410 aaPredicted RBP8.16□□□□□ -1.1
TTC28-208ENST00000612946 DAPP51397 102 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 PJVKQ0ZLH3 352 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 PGBD5Q8N414 524 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 FBXL6Q8N531 539 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 TOMM40LQ969M1 308 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 CIB3Q96Q77 187 aaPredicted RBP8.16□□□□□ -1.1
TTC28-208ENST00000612946 ACTR3CQ9C0K3 210 aaPredicted RBP8.16□□□□□ -1.1
TTC28-208ENST00000612946 EXOGQ9Y2C4 368 aaKnown RBP8.16□□□□□ -1.1
TTC28-208ENST00000612946 YARS2Q9Y2Z4 477 aaKnown RBP8.16□□□□□ -1.1
TTC28-208ENST00000612946 ARAP2Q8WZ64 1704 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 M0R1X1 148 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 CELF2O95319 508 aaKnown RBP8.16□□□□□ -1.1
TTC28-208ENST00000612946 SYNGR4O95473 234 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 ADH1BP00325 375 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 CLCNKAP51800 687 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 BIDP55957 195 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 FA2HQ7L5A8 372 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 CPXM2Q8N436 756 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 SMIM3Q9BZL3 60 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 SLIRPQ9GZT3 109 aaKnown RBP8.16□□□□□ -1.1
TTC28-208ENST00000612946 CNOT1A5YKK6 2376 aaKnown RBP8.16□□□□□ -1.1
TTC28-208ENST00000612946 ZNF727A8MUV8 499 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 ENPP3O14638 875 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 CNMDO75829 334 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 ARAFP10398 606 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 SOWAHAQ2M3V2 549 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 TIGITQ495A1 244 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 TMEM130Q8N3G9 435 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 CD200R1Q8TD46 325 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 NANOS1Q8WY41 292 aaKnown RBP8.16□□□□□ -1.1
TTC28-208ENST00000612946 NTNG2Q96CW9 530 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 PACRGQ96M98 296 aaPredicted RBP8.16□□□□□ -1.1
TTC28-208ENST00000612946 USP36Q9P275 1121 aaKnown RBP8.16□□□□□ -1.1
TTC28-208ENST00000612946 DNAJB11Q9UBS4 358 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 CEBPZOSA8MTT3 80 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 ZNF724A8MTY0 619 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 DVL1O14640 695 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 ZNF728P0DKX0 622 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 EMP2P54851 167 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 PRSS58Q8IYP2 241 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 PELI3Q8N2H9 469 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 FBXW5Q969U6 566 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 MS4A10Q96PG2 267 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 SLC25A18Q9H1K4 315 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 SEMA6CQ9H3T2 930 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 C2orf72A6NCS6 295 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 FOXE1O00358 373 aaPredicted RBP8.16□□□□□ -1.1
TTC28-208ENST00000612946 ZNF25P17030 456 aaPredicted RBP8.16□□□□□ -1.1
TTC28-208ENST00000612946 MMP11P24347 488 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 ACKR3P25106 362 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 NOVA1P51513 510 aaKnown RBP8.16□□□□□ -1.1
TTC28-208ENST00000612946 MAP2K6P52564 334 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 TBPL1P62380 186 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 NFATC4Q14934 902 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 CTF1Q16619 201 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 TMEM97Q5BJF2 176 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 LRRC73Q5JTD7 316 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 UCK1Q9HA47 277 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 DEC1Q9P2X7 70 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 DOCK8Q8NF50 2099 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 CST4P01036 141 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 CSNK1A1P48729 337 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 WBP2NLQ6ICG8 309 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 Q6ZRG5 221 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 ANAPC16Q96DE5 110 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 LRRC3BQ96PB8 259 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 LAMP3Q9UQV4 416 aa8.16□□□□□ -1.1
TTC28-208ENST00000612946 GBF1Q92538 1859 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 CST3P01034 146 aaPredicted RBP8.15□□□□□ -1.1
TTC28-208ENST00000612946 EPHX1P07099 455 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 TMEM225BP0DP42 221 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 TAS2R45P59539 299 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 FBXL22Q6P050 247 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 LYG2Q86SG7 212 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 KIRREL1Q96J84 757 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 OR2A14Q96R47 310 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 ZNF142P52746 1687 aaPredicted RBP8.15□□□□□ -1.1
TTC28-208ENST00000612946 ZNF891A8MT65 544 aaPredicted RBP8.15□□□□□ -1.1
TTC28-208ENST00000612946 SLC31A2O15432 143 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 STBD1O95210 358 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 ASGR2P07307 311 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 NPBWR1P48145 328 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 RTL8BQ17RB0 113 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 DUSP28Q4G0W2 176 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms