RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 WIPF3A6NGB9 483 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 CPSF4LA6NMK7 179 aaKnown RBP7.93□□□□□ -1.14
SMAD4-217ENST00000611848 ETV2O00321 342 aaPredicted RBP7.93□□□□□ -1.14
SMAD4-217ENST00000611848 AP3D1O14617 1153 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 OIP5O43482 229 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 FRS3O43559 492 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 PRKYO43930 277 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 HOXB1P14653 301 aaPredicted RBP7.93□□□□□ -1.14
SMAD4-217ENST00000611848 ZNF12P17014 697 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 ZNF708P17019 499 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 POU3F2P20265 443 aaPredicted RBP7.93□□□□□ -1.14
SMAD4-217ENST00000611848 FPR3P25089 353 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 GRK5P34947 590 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 IDUAP35475 653 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 SLC6A8P48029 635 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 STARP49675 285 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 CLK1P49759 484 aaKnown RBP7.93□□□□□ -1.14
SMAD4-217ENST00000611848 LHX2P50458 406 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 ZNF136P52737 540 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 CLDN18P56856 261 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 RGS8P57771 180 aaPredicted RBP7.93□□□□□ -1.14
SMAD4-217ENST00000611848 ZNF91Q05481 1191 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 NDUFAF6Q330K2 333 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 SLC25A53Q5H9E4 307 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 MRPL2Q5T653 305 aaKnown RBP7.93□□□□□ -1.14
SMAD4-217ENST00000611848 C1orf185Q5T7R7 199 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 RPTNQ6XPR3 784 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 ZNF730Q6ZMV8 503 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 MBOAT2Q6ZWT7 520 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 USP43Q70EL4 1123 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 GDF7Q7Z4P5 450 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 ZBTB46Q86UZ6 589 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 GRAMD2AQ8IUY3 354 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 ZNF440Q8IYI8 595 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 MFSD4AQ8N468 514 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 MEIOBQ8N635 442 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 IQCF1Q8N6M8 205 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 TMEM163Q8TC26 289 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 ZPLD1Q8TCW7 415 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 TMEM234Q8WY98 164 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 ST8SIA1Q92185 356 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 SLC35B4Q969S0 331 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 SLC41A3Q96GZ6 507 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 CCDC120Q96HB5 630 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 MRGPRX4Q96LA9 322 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 OR5M11Q96RB7 305 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 MGLLQ99685 303 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 MCHR1Q99705 422 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 TSSK6Q9BXA6 273 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 PLA2G12AQ9BZM1 189 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 WDR12Q9GZL7 423 aaKnown RBP7.93□□□□□ -1.14
SMAD4-217ENST00000611848 NXF2Q9GZY0 626 aaKnown RBP7.93□□□□□ -1.14
SMAD4-217ENST00000611848 DCSTAMPQ9H295 470 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 HMG20AQ9NP66 347 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 CTPS2Q9NRF8 586 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 DNAJB12Q9NXW2 375 aaKnown RBP7.93□□□□□ -1.14
SMAD4-217ENST00000611848 TAS2R16Q9NYV7 291 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 TVP23BQ9NYZ1 205 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 DNAJC27Q9NZQ0 273 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 TESQ9UGI8 421 aaKnown RBP7.93□□□□□ -1.14
SMAD4-217ENST00000611848 MPDZO75970 2070 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 CDHR4A6H8M9 788 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 H3BML4 177 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 J3QRK9 145 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 TLX2O43763 284 aaPredicted RBP7.92□□□□□ -1.14
SMAD4-217ENST00000611848 FMO6PO60774 539 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 SCG5P05408 212 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 PRKCAP17252 672 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 DLX5P56178 289 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 RPS3AP61247 264 aaKnown RBP7.92□□□□□ -1.14
SMAD4-217ENST00000611848 RAC1P63000 192 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 HOXC5Q00444 222 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 FOXF1Q12946 379 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 DOC2BQ14184 412 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 QPRTQ15274 297 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 SYT14P1Q58G82 188 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 RTL6Q6ICC9 239 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 SLC27A4Q6P1M0 643 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 C16orf87Q6PH81 154 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 C3P1Q6ZMU1 363 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 PLEKHM3Q6ZWE6 761 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 ZNF550Q7Z398 422 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 ADCK1Q86TW2 530 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 IGFN1Q86VF2 1251 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 NKAIN4Q8IVV8 208 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 CLDN22Q8N7P3 220 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 NANOGP1Q8N7R0 232 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 PROKR2Q8NFJ6 384 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 OR8D4Q8NGM9 314 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 OR5M1Q8NGP8 315 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 ZNF563Q8TA94 476 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 PIGXQ8TBF5 258 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 TEX47Q8TBZ9 253 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 POC1BQ8TC44 478 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 CNOT9Q92600 299 aaKnown RBP7.92□□□□□ -1.14
SMAD4-217ENST00000611848 ZNF582Q96NG8 517 aaPredicted RBP7.92□□□□□ -1.14
SMAD4-217ENST00000611848 KLHDC3Q9BQ90 382 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 TTYH2Q9BSA4 534 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 EGLN3Q9H6Z9 239 aa7.92□□□□□ -1.14
SMAD4-217ENST00000611848 EVA1AQ9H8M9 152 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms