RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 NKX2-2O95096 273 aa13.79□□□□□ -0.2
PCDHGB1-202ENST00000611598 AK1P00568 194 aa13.79□□□□□ -0.2
PCDHGB1-202ENST00000611598 HNRNPA1P09651 372 aaKnown RBP eCLIP13.79□□□□□ -0.2
PCDHGB1-202ENST00000611598 IL32P24001 234 aa13.79□□□□□ -0.2
PCDHGB1-202ENST00000611598 RPS27P42677 84 aaKnown RBP13.79□□□□□ -0.2
PCDHGB1-202ENST00000611598 TPMTP51580 245 aa13.79□□□□□ -0.2
PCDHGB1-202ENST00000611598 NNATQ16517 81 aa13.79□□□□□ -0.2
PCDHGB1-202ENST00000611598 DPY19L2P2Q6ZN68 376 aa13.79□□□□□ -0.2
PCDHGB1-202ENST00000611598 DNM1P46Q6ZS02 220 aa13.79□□□□□ -0.2
PCDHGB1-202ENST00000611598 BIVMQ86UB2 503 aa13.79□□□□□ -0.2
PCDHGB1-202ENST00000611598 OR5AK2Q8NH90 309 aa13.79□□□□□ -0.2
PCDHGB1-202ENST00000611598 ZNF296Q8WUU4 475 aaPredicted RBP13.79□□□□□ -0.2
PCDHGB1-202ENST00000611598 FGF13Q92913 245 aa13.79□□□□□ -0.2
PCDHGB1-202ENST00000611598 LRFN5Q96NI6 719 aa13.79□□□□□ -0.2
PCDHGB1-202ENST00000611598 APOOQ9BUR5 198 aa13.79□□□□□ -0.2
PCDHGB1-202ENST00000611598 SLC6A17Q9H1V8 727 aa13.79□□□□□ -0.2
PCDHGB1-202ENST00000611598 MKKSQ9NPJ1 570 aaPredicted RBP13.79□□□□□ -0.2
PCDHGB1-202ENST00000611598 MED11Q9P086 117 aa13.79□□□□□ -0.2
PCDHGB1-202ENST00000611598 CACNA1CQ13936 2221 aa13.79□□□□□ -0.2
PCDHGB1-202ENST00000611598 HEATR5AQ86XA9 2040 aa13.79□□□□□ -0.2
PCDHGB1-202ENST00000611598 REV3LO60673 3130 aa13.79□□□□□ -0.2
PCDHGB1-202ENST00000611598 H7C417 338 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 RBBP9O75884 186 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 GNRH1P01148 92 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 SORDQ00796 357 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 PDGFRLQ15198 375 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 ULK3Q6PHR2 472 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 C17orf107Q6ZR85 190 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 NAXDQ8IW45 347 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 PDZD9Q8IXQ8 264 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 OR51S1Q8NGJ8 323 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 OR5M9Q8NGP3 310 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 SPPL3Q8TCT6 385 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 TRIM43Q96BQ3 446 aaPredicted RBP13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 CTHRC1Q96CG8 243 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 MRPS24Q96EL2 167 aaKnown RBP13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 RSPH9Q9H1X1 276 aaPredicted RBP13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 TMEM138Q9NPI0 162 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 RXFP3Q9NSD7 469 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 MTFP1Q9UDX5 166 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 DTX4Q9Y2E6 619 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 HRKO00198 91 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 SDC3O75056 442 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 GLCEO94923 617 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 KDM4BO94953 1096 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 APOC3P02656 99 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 MNDAP41218 407 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 ALKBH1Q13686 389 aaKnown RBP13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 ETFDHQ16134 617 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 HYAL4Q2M3T9 481 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 PRRT3Q5FWE3 981 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 ZCCHC12Q6PEW1 402 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 FIGLAQ6QHK4 219 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 ABHD13Q7L211 337 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 CDH26Q8IXH8 852 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 SLC43A2Q8N370 569 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 OR14C36Q8NHC7 312 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 TNFAIP8L1Q8WVP5 186 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 DVL3Q92997 716 aaPredicted RBP13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 SLC17A9Q9BYT1 436 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 ULBP3Q9BZM4 244 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 STARD5Q9NSY2 213 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 PRSS38A1L453 326 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 H0YGG7 62 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 DCTN6O00399 190 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 KAT7O95251 611 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 LDOC1O95751 146 aaPredicted RBP13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 ANXA2P07355 339 aaKnown RBP13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 ARF3P61204 181 aaPredicted RBP13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 RIPPLY1Q0D2K3 151 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 UBXN2BQ14CS0 331 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 SLC35D3Q5M8T2 416 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 TSSK4Q6SA08 328 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 HSD17B13Q7Z5P4 300 aaPredicted RBP13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 MARC2Q969Z3 335 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 ANKRD9Q96BM1 317 aaPredicted RBP13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 MRPL48Q96GC5 212 aaKnown RBP13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 ASB16Q96NS5 453 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 LMAN2LQ9H0V9 348 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 SLITRK2Q9H156 845 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 HRH3Q9Y5N1 445 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 HEBP2Q9Y5Z4 205 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 ETV7Q9Y603 341 aa13.78□□□□□ -0.2
PCDHGB1-202ENST00000611598 MPDZO75970 2070 aa13.77□□□□□ -0.21
PCDHGB1-202ENST00000611598 POM121BA6NF01 834 aa13.77□□□□□ -0.21
PCDHGB1-202ENST00000611598 D6RAR5 112 aa13.77□□□□□ -0.21
PCDHGB1-202ENST00000611598 BLOC1S5-TXNDC5H3BN57 136 aa13.77□□□□□ -0.21
PCDHGB1-202ENST00000611598 H3BUI4 141 aa13.77□□□□□ -0.21
PCDHGB1-202ENST00000611598 H7C1C5 153 aa13.77□□□□□ -0.21
PCDHGB1-202ENST00000611598 XRCC3O43542 346 aa13.77□□□□□ -0.21
PCDHGB1-202ENST00000611598 CSRP1P21291 193 aaKnown RBP13.77□□□□□ -0.21
PCDHGB1-202ENST00000611598 PGDP52209 483 aa13.77□□□□□ -0.21
PCDHGB1-202ENST00000611598 ADPRHP54922 357 aa13.77□□□□□ -0.21
PCDHGB1-202ENST00000611598 LCN6P62502 163 aa13.77□□□□□ -0.21
PCDHGB1-202ENST00000611598 HTRA4P83105 476 aaPredicted RBP13.77□□□□□ -0.21
PCDHGB1-202ENST00000611598 FAM74A1Q5RGS3 127 aa13.77□□□□□ -0.21
PCDHGB1-202ENST00000611598 C11orf88Q6PI97 169 aa13.77□□□□□ -0.21
PCDHGB1-202ENST00000611598 OR51D1Q8NGF3 324 aa13.77□□□□□ -0.21
PCDHGB1-202ENST00000611598 OR8S1Q8NH09 359 aa13.77□□□□□ -0.21
PCDHGB1-202ENST00000611598 CCDC74AQ96AQ1 378 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms