RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 ZFP57Q9NU63 452 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 ATXN7L1Q9ULK2 861 aaPredicted RBP13.48□□□□□ -0.25
VPS36-207ENST00000611132 PLPP2O43688 288 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 PRAMEF4O60810 478 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 CD160O95971 181 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 CD14P08571 375 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 HIST1H1CP16403 213 aaKnown RBP13.48□□□□□ -0.25
VPS36-207ENST00000611132 DIO1P49895 249 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 UBE2IP63279 158 aaKnown RBP13.48□□□□□ -0.25
VPS36-207ENST00000611132 ARL6IP1Q15041 203 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 SLC9A3R2Q15599 337 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 ARHGAP11BQ3KRB8 267 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 PRAMEF9Q5VWM5 478 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 SLC35D2Q76EJ3 337 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 TECPR1Q7Z6L1 1165 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 FOXN4Q96NZ1 517 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 TRAF4Q9BUZ4 470 aaPredicted RBP13.48□□□□□ -0.25
VPS36-207ENST00000611132 EXOGQ9Y2C4 368 aaKnown RBP13.48□□□□□ -0.25
VPS36-207ENST00000611132 OR5H14A6NHG9 310 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 PEX12O00623 359 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 CCSO14618 274 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 CLRN1P58418 232 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 DUSP8Q13202 625 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 FAM74A1Q5RGS3 127 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 METRNLQ641Q3 311 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 TMEM81Q6P7N7 255 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 ACOT7LQ6ZUV0 252 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 TMPRSS9Q7Z410 1059 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 SGPP2Q8IWX5 399 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 WDSUB1Q8N9V3 476 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 OR4K17Q8NGC6 315 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 OR11H7Q8NGC8 314 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 YIPF5Q969M3 257 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 Q96M85 177 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 OR5K4A6NMS3 321 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 HOXB5P09067 269 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 SDHBP21912 280 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 P2RX1P51575 399 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 HLXQ14774 488 aaPredicted RBP13.48□□□□□ -0.25
VPS36-207ENST00000611132 ADAMTSL4Q6UY14 1074 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 FBXL6Q8N531 539 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 CNRIP1Q96F85 164 aaPredicted RBP13.48□□□□□ -0.25
VPS36-207ENST00000611132 SORCS2Q96PQ0 1159 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 APOOQ9BUR5 198 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 DUSP22Q9NRW4 184 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 NDRG3Q9UGV2 375 aa13.48□□□□□ -0.25
VPS36-207ENST00000611132 LSM2Q9Y333 95 aaKnown RBP13.48□□□□□ -0.25
VPS36-207ENST00000611132 UBR3Q6ZT12 1888 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 ZNF850A8MQ14 1090 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 SEMG1P04279 462 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 GPNMBQ14956 572 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 TMEM88Q6PEY1 159 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 SLC16A9Q7RTY1 509 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 TMEFF1Q8IYR6 380 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 OR5M1Q8NGP8 315 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 OR10Z1Q8NGY1 313 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 ZFPM2Q8WW38 1151 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 MIB2Q96AX9 1013 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 WDR89Q96FK6 387 aaPredicted RBP13.47□□□□□ -0.25
VPS36-207ENST00000611132 SMIM3Q9BZL3 60 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 KLRF1Q9NZS2 232 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 ANKRD61A6NGH8 418 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 TBX19O60806 448 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 ZNF254O75437 659 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 SPI1P17947 270 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 CLDN6P56747 220 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 LGALSLQ3ZCW2 172 aaPredicted RBP13.47□□□□□ -0.25
VPS36-207ENST00000611132 SLC25A30Q5SVS4 291 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 ADAMTS18Q8TE60 1221 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 ORAI1Q96D31 301 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 SCMH1Q96GD3 660 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 CRB3Q9BUF7 120 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 NIT2Q9NQR4 276 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 CRTAPO75718 401 aaPredicted RBP13.47□□□□□ -0.25
VPS36-207ENST00000611132 CLUP10909 449 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 MAOBP27338 520 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 SLC6A8P48029 635 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 EMP2P54851 167 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 AGERQ15109 404 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 Q6ZNB5 142 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 C2CD4CQ8TF44 421 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 DIO2Q92813 273 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 LINC00052Q96N35 136 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 ARHGDIGQ99819 225 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 ST6GALNAC5Q9BVH7 336 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 CCDC86Q9H6F5 360 aaKnown RBP13.47□□□□□ -0.25
VPS36-207ENST00000611132 ENTPD2Q9Y5L3 495 aa13.47□□□□□ -0.25
VPS36-207ENST00000611132 LRRC37AA6NMS7 1700 aa13.46□□□□□ -0.25
VPS36-207ENST00000611132 TMEM269A0A1B0GVZ9 245 aa13.46□□□□□ -0.25
VPS36-207ENST00000611132 PYCARD-AS1I3L0S3 204 aa13.46□□□□□ -0.25
VPS36-207ENST00000611132 CD79BP40259 229 aa13.46□□□□□ -0.25
VPS36-207ENST00000611132 TRMT12Q53H54 448 aaKnown RBP13.46□□□□□ -0.25
VPS36-207ENST00000611132 GLYATL3Q5SZD4 288 aa13.46□□□□□ -0.25
VPS36-207ENST00000611132 Q6ZTK2 550 aa13.46□□□□□ -0.25
VPS36-207ENST00000611132 ZFP82Q8N141 532 aa13.46□□□□□ -0.25
VPS36-207ENST00000611132 PGAM5Q96HS1 289 aa13.46□□□□□ -0.25
VPS36-207ENST00000611132 GPR137Q96N19 417 aa13.46□□□□□ -0.25
VPS36-207ENST00000611132 LRFN5Q96NI6 719 aa13.46□□□□□ -0.25
VPS36-207ENST00000611132 ULBP3Q9BZM4 244 aa13.46□□□□□ -0.25
VPS36-207ENST00000611132 SEMA4CQ9C0C4 833 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms