RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 C2orf72A6NCS6 295 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 DISC1C4P0D8 188 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 ERVH48-1M5A8F1 160 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 SPINT1O43278 529 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 DCNP07585 359 aaKnown RBP6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 ITGA5P08648 1049 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 CD34P28906 385 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 LSSP48449 732 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 DIO1P49895 249 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 PER3P56645 1201 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 BDH1Q02338 343 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 ZP2Q05996 745 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 ALKBH1Q13686 389 aaKnown RBP6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 DEFB133Q30KQ1 61 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 SLC6A19Q695T7 634 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 WBP2NLQ6ICG8 309 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 TEX261Q6UWH6 196 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 ZNF440Q8IYI8 595 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 OR2L13Q8N349 312 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 ZNF615Q8N8J6 731 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 OR51S1Q8NGJ8 323 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 OR51Q1Q8NH59 317 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 FGF14Q92915 247 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 ADGRL4Q9HBW9 690 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 CGGBP1Q9UFW8 167 aaPredicted RBP6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 SLC17A4Q9Y2C5 497 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 U3KQ87 197 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 KNTC1P50748 2209 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 ZNF736B4DX44 427 aaPredicted RBP6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 ZNF878C9JN71 531 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 ZNF264O43296 627 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 BRINP1O60477 761 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 GMDSO60547 372 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 GALR3O60755 368 aaPredicted RBP6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 AKAIN1P0CW23 69 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 PGCP20142 388 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 SLC2A5P22732 501 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 POU3F4P49335 361 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 ACTBP60709 375 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 PPP1CAP62136 330 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 ACTG1P63261 375 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 CBFBQ13951 182 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 MELKQ14680 651 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 ZIC1Q15915 447 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 MRM1Q6IN84 353 aaKnown RBP6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 DNM1P34Q6PK57 102 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 RTL10Q7L3V2 364 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 ZNF546Q86UE3 836 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 SFTPA2Q8IWL1 248 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 NPRL2Q8WTW4 380 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 RBP7Q96R05 134 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 STACQ99469 402 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 C1QTNF6Q9BXI9 259 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 NKX2-4Q9H2Z4 354 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 TCEAL2Q9H3H9 227 aaPredicted RBP6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 DZANK1Q9NVP4 752 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 EXOGQ9Y2C4 368 aaKnown RBP6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 ANKRD36A6QL64 1941 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 FITM1A5D6W6 292 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 GABARAPH6UMI1 98 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 PLPP2O43688 288 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 GLCEO94923 617 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 ZFPL1O95159 310 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 TBX6O95947 436 aaPredicted RBP6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 RLN2P04090 185 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 ZNF28P17035 718 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 RBM34P42696 430 aaKnown RBP6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 RABIFP47224 123 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 DOC2BQ14184 412 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 Q5BKY6 102 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 OR10K2Q6IF99 312 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 WDR88Q6ZMY6 472 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 IDO2Q6ZQW0 420 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 KIAA0907Q7Z7F0 614 aaPredicted RBP6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 RFLNBQ8N5W9 214 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 C16orf52Q8NHV5 167 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 GIMAP5Q96F15 307 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 ZNF681Q96N22 645 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 OR2A5Q96R48 311 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 TSNAXQ99598 290 aaKnown RBP6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 NUDT22Q9BRQ3 303 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 PLA2G2FQ9BZM2 168 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 MBD2Q9UBB5 411 aa6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 SF3B6Q9Y3B4 125 aaKnown RBP6.29□□□□□ -1.4
SYNPO2-206ENST00000610556 SCN4AP35499 1836 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 GPANK1O95872 356 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 HPXP02790 462 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 SFTPBP07988 381 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 CSF1P09603 554 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 POU3F3P20264 500 aaPredicted RBP6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 CEBPGP53567 150 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 TAS2R20P59543 309 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 ZNF85Q03923 595 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 GK2Q14410 553 aaPredicted RBP6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 RBMS2Q15434 407 aaKnown RBP6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 SWI5Q1ZZU3 235 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 LINC00303Q3SY05 128 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 GLYATL3Q5SZD4 288 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 TSSK4Q6SA08 328 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms