RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 RCE1Q9Y256 329 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 AMDHD2Q9Y303 409 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 CORINQ9Y5Q5 1042 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 ATP23Q9Y6H3 246 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 ALPK2Q86TB3 2170 aa12.68□□□□□ -0.38
HDDC2-204ENST00000608295 FLNAP21333 2647 aaKnown RBP12.68□□□□□ -0.38
HDDC2-204ENST00000608295 ACANP16112 2415 aa12.67□□□□□ -0.38
HDDC2-204ENST00000608295 SLC35F4A4IF30 521 aa12.67□□□□□ -0.38
HDDC2-204ENST00000608295 TRIM64A6NGJ6 449 aa12.67□□□□□ -0.38
HDDC2-204ENST00000608295 TRIM64BA6NI03 449 aa12.67□□□□□ -0.38
HDDC2-204ENST00000608295 PLPP3O14495 311 aa12.67□□□□□ -0.38
HDDC2-204ENST00000608295 RNF13O43567 381 aa12.67□□□□□ -0.38
HDDC2-204ENST00000608295 ZNF432O94892 652 aa12.67□□□□□ -0.38
HDDC2-204ENST00000608295 IFNGR1P15260 489 aa12.67□□□□□ -0.38
HDDC2-204ENST00000608295 PRPS1P60891 318 aa12.67□□□□□ -0.38
HDDC2-204ENST00000608295 LSM11P83369 360 aaKnown RBP eCLIP12.67□□□□□ -0.38
HDDC2-204ENST00000608295 NPRL3Q12980 569 aa12.67□□□□□ -0.38
HDDC2-204ENST00000608295 MFSD13AQ14CX5 517 aa12.67□□□□□ -0.38
HDDC2-204ENST00000608295 Q71RC1 249 aaPredicted RBP12.67□□□□□ -0.38
HDDC2-204ENST00000608295 SLC46A3Q7Z3Q1 461 aa12.67□□□□□ -0.38
HDDC2-204ENST00000608295 TMEM123Q8N131 208 aa12.67□□□□□ -0.38
HDDC2-204ENST00000608295 ADPRHL1Q8NDY3 354 aa12.67□□□□□ -0.38
HDDC2-204ENST00000608295 SMAP2Q8WU79 429 aaPredicted RBP12.67□□□□□ -0.38
HDDC2-204ENST00000608295 SMR3AQ99954 134 aa12.67□□□□□ -0.38
HDDC2-204ENST00000608295 USB1Q9BQ65 265 aaKnown RBP12.67□□□□□ -0.38
HDDC2-204ENST00000608295 NELFAQ9H3P2 528 aa12.67□□□□□ -0.38
HDDC2-204ENST00000608295 CXorf56Q9H5V9 222 aa12.67□□□□□ -0.38
HDDC2-204ENST00000608295 GPR35Q9HC97 309 aa12.67□□□□□ -0.38
HDDC2-204ENST00000608295 NANSQ9NR45 359 aa12.67□□□□□ -0.38
HDDC2-204ENST00000608295 PRDM4Q9UKN5 801 aa12.67□□□□□ -0.38
HDDC2-204ENST00000608295 MOKQ9UQ07 419 aa12.67□□□□□ -0.38
HDDC2-204ENST00000608295 MAP1AP78559 2803 aaPredicted RBP12.66□□□□□ -0.38
HDDC2-204ENST00000608295 PLCE1Q9P212 2302 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 BLOC1S5-TXNDC5H3BN57 136 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 SMAD7O15105 426 aaKnown RBP12.66□□□□□ -0.38
HDDC2-204ENST00000608295 FZD7O75084 574 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 NDUFS7O75251 213 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 OR5F1O95221 314 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 WNT11O96014 354 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 MT-ATP6P00846 226 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 F13BP05160 661 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 CELA3BP08861 270 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 B4GALT1P15291 398 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 ATP5J2P56134 94 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 PGGHGQ32M88 737 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 C8orf82Q6P1X6 216 aaPredicted RBP12.66□□□□□ -0.38
HDDC2-204ENST00000608295 LINC00114Q6XXX2 140 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 FKBP9P1Q75LS8 142 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 SLC35D2Q76EJ3 337 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 MYPOPQ86VE0 399 aaPredicted RBP12.66□□□□□ -0.38
HDDC2-204ENST00000608295 C17orf78Q8N4C9 275 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 SCAIQ8N9R8 606 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 PIK3C3Q8NEB9 887 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 TMEM239Q8WW34 195 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 LZICQ8WZA0 190 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 BCL2L2Q92843 193 aaPredicted RBP12.66□□□□□ -0.38
HDDC2-204ENST00000608295 CMTM5Q96DZ9 223 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 MPP4Q96JB8 637 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 TMUB1Q9BVT8 246 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 ULBP2Q9BZM5 246 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 PCDHAC1Q9H158 963 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 GSX1Q9H4S2 264 aaPredicted RBP12.66□□□□□ -0.38
HDDC2-204ENST00000608295 ARL8BQ9NVJ2 186 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 NOX1Q9Y5S8 564 aa12.66□□□□□ -0.38
HDDC2-204ENST00000608295 IGHV1-18A0A0C4DH31 117 aa12.65□□□□□ -0.38
HDDC2-204ENST00000608295 ZNF503-AS2A6NEH8 195 aa12.65□□□□□ -0.38
HDDC2-204ENST00000608295 ZNF726A6NNF4 738 aa12.65□□□□□ -0.38
HDDC2-204ENST00000608295 E7EQL1 145 aa12.65□□□□□ -0.38
HDDC2-204ENST00000608295 HIST1H2ABP04908 130 aa12.65□□□□□ -0.38
HDDC2-204ENST00000608295 IFNW1P05000 195 aa12.65□□□□□ -0.38
HDDC2-204ENST00000608295 DANCRP0C864 163 aa12.65□□□□□ -0.38
HDDC2-204ENST00000608295 PTAFRP25105 342 aa12.65□□□□□ -0.38
HDDC2-204ENST00000608295 MSX2P35548 267 aaPredicted RBP12.65□□□□□ -0.38
HDDC2-204ENST00000608295 CSNK1A1P48729 337 aa12.65□□□□□ -0.38
HDDC2-204ENST00000608295 IDH3GP51553 393 aaPredicted RBP12.65□□□□□ -0.38
HDDC2-204ENST00000608295 SELENOWP63302 87 aa12.65□□□□□ -0.38
HDDC2-204ENST00000608295 MXRA7P84157 204 aa12.65□□□□□ -0.38
HDDC2-204ENST00000608295 TOP3AQ13472 1001 aaPredicted RBP12.65□□□□□ -0.38
HDDC2-204ENST00000608295 VHLLQ6RSH7 139 aa12.65□□□□□ -0.38
HDDC2-204ENST00000608295 HIST3H2AQ7L7L0 130 aa12.65□□□□□ -0.38
HDDC2-204ENST00000608295 CIARTQ8N365 385 aaPredicted RBP12.65□□□□□ -0.38
HDDC2-204ENST00000608295 OR6S1Q8NH40 331 aa12.65□□□□□ -0.38
HDDC2-204ENST00000608295 HIST1H2ACQ93077 130 aa12.65□□□□□ -0.38
HDDC2-204ENST00000608295 SGTBQ96EQ0 304 aa12.65□□□□□ -0.38
HDDC2-204ENST00000608295 PRRC1Q96M27 445 aa12.65□□□□□ -0.38
HDDC2-204ENST00000608295 HOPXQ9BPY8 73 aaPredicted RBP12.65□□□□□ -0.38
HDDC2-204ENST00000608295 LINC00470Q9BZP3 86 aa12.65□□□□□ -0.38
HDDC2-204ENST00000608295 FKRPQ9H9S5 495 aa12.65□□□□□ -0.38
HDDC2-204ENST00000608295 TAS2R5Q9NYW4 299 aa12.65□□□□□ -0.38
HDDC2-204ENST00000608295 A4GNTQ9UNA3 340 aa12.65□□□□□ -0.38
HDDC2-204ENST00000608295 OR6C65A6NJZ3 312 aa12.64□□□□□ -0.39
HDDC2-204ENST00000608295 MCIDASD6RGH6 385 aa12.64□□□□□ -0.39
HDDC2-204ENST00000608295 H7C1Q1 480 aa12.64□□□□□ -0.39
HDDC2-204ENST00000608295 ARHGEF9O43307 516 aa12.64□□□□□ -0.39
HDDC2-204ENST00000608295 OR7A10O76100 309 aa12.64□□□□□ -0.39
HDDC2-204ENST00000608295 MT-ND1P03886 318 aa12.64□□□□□ -0.39
HDDC2-204ENST00000608295 IFI30P13284 250 aa12.64□□□□□ -0.39
HDDC2-204ENST00000608295 AQP2P41181 271 aa12.64□□□□□ -0.39
HDDC2-204ENST00000608295 MYBPC1Q00872 1141 aa12.64□□□□□ -0.39
HDDC2-204ENST00000608295 RPL18Q07020 188 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms