RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 ACVR1BP36896 505 aa16.78■□□□□ 0.28
CTSA-217ENST00000607482 MDH1P40925 334 aaKnown RBP16.78■□□□□ 0.28
CTSA-217ENST00000607482 TUBA1BP68363 451 aa16.78■□□□□ 0.28
CTSA-217ENST00000607482 TUBA4AP68366 448 aa16.78■□□□□ 0.28
CTSA-217ENST00000607482 PPP2R2BQ00005 443 aa16.78■□□□□ 0.28
CTSA-217ENST00000607482 MS4A18Q3C1V0 323 aa16.78■□□□□ 0.28
CTSA-217ENST00000607482 LRRC23Q53EV4 343 aaPredicted RBP16.78■□□□□ 0.28
CTSA-217ENST00000607482 DEF8Q6ZN54 512 aa16.78■□□□□ 0.28
CTSA-217ENST00000607482 TUBA1AQ71U36 451 aa16.78■□□□□ 0.28
CTSA-217ENST00000607482 CCDC80Q76M96 950 aa16.78■□□□□ 0.28
CTSA-217ENST00000607482 PXKQ7Z7A4 578 aa16.78■□□□□ 0.28
CTSA-217ENST00000607482 CARM1Q86X55 608 aa16.78■□□□□ 0.28
CTSA-217ENST00000607482 OR5J2Q8NH18 312 aa16.78■□□□□ 0.28
CTSA-217ENST00000607482 C10orf82Q8WW14 230 aa16.78■□□□□ 0.28
CTSA-217ENST00000607482 TPD52L3Q96J77 140 aa16.78■□□□□ 0.28
CTSA-217ENST00000607482 GRIP2Q9C0E4 1043 aa16.78■□□□□ 0.28
CTSA-217ENST00000607482 ARMCX1Q9P291 453 aa16.78■□□□□ 0.28
CTSA-217ENST00000607482 ZFHX3Q15911 3703 aa16.78■□□□□ 0.28
CTSA-217ENST00000607482 NIPBLQ6KC79 2804 aaeCLIP16.78■□□□□ 0.28
CTSA-217ENST00000607482 SLC35F4A4IF30 521 aa16.77■□□□□ 0.28
CTSA-217ENST00000607482 RNF223E7ERA6 249 aa16.77■□□□□ 0.28
CTSA-217ENST00000607482 LRRN3E7EW58 273 aa16.77■□□□□ 0.28
CTSA-217ENST00000607482 PLPP3O14495 311 aa16.77■□□□□ 0.28
CTSA-217ENST00000607482 GSTA4O15217 222 aa16.77■□□□□ 0.28
CTSA-217ENST00000607482 SLC22A2O15244 555 aa16.77■□□□□ 0.28
CTSA-217ENST00000607482 ZNF432O94892 652 aa16.77■□□□□ 0.28
CTSA-217ENST00000607482 HPRP00739 348 aa16.77■□□□□ 0.28
CTSA-217ENST00000607482 CD8AP01732 235 aa16.77■□□□□ 0.28
CTSA-217ENST00000607482 IGHV4-39P01824 125 aa16.77■□□□□ 0.28
CTSA-217ENST00000607482 TP53P04637 393 aaPredicted RBP16.77■□□□□ 0.28
CTSA-217ENST00000607482 HLA-DOBP13765 273 aa16.77■□□□□ 0.28
CTSA-217ENST00000607482 NPTX1Q15818 432 aa16.77■□□□□ 0.28
CTSA-217ENST00000607482 CGB2Q6NT52 195 aa16.77■□□□□ 0.28
CTSA-217ENST00000607482 LINGO2Q7L985 606 aa16.77■□□□□ 0.28
CTSA-217ENST00000607482 CCDC36Q8IYA8 594 aa16.77■□□□□ 0.28
CTSA-217ENST00000607482 OR2T12Q8NG77 320 aa16.77■□□□□ 0.28
CTSA-217ENST00000607482 MAGEE2Q8TD90 523 aaPredicted RBP16.77■□□□□ 0.28
CTSA-217ENST00000607482 LZICQ8WZA0 190 aa16.77■□□□□ 0.28
CTSA-217ENST00000607482 SLC41A3Q96GZ6 507 aa16.77■□□□□ 0.28
CTSA-217ENST00000607482 RHNO1Q9BSD3 238 aa16.77■□□□□ 0.28
CTSA-217ENST00000607482 ULBP2Q9BZM5 246 aa16.77■□□□□ 0.28
CTSA-217ENST00000607482 CCDC134Q9H6E4 229 aa16.77■□□□□ 0.28
CTSA-217ENST00000607482 MED29Q9NX70 200 aa16.77■□□□□ 0.28
CTSA-217ENST00000607482 GDF2Q9UK05 429 aaPredicted RBP16.77■□□□□ 0.28
CTSA-217ENST00000607482 AP3M1Q9Y2T2 418 aa16.77■□□□□ 0.28
CTSA-217ENST00000607482 NF1P21359 2839 aa16.77■□□□□ 0.27
CTSA-217ENST00000607482 ARPC4-TTLL3A0A0A6YYG9 625 aa16.76■□□□□ 0.27
CTSA-217ENST00000607482 IGHV1-18A0A0C4DH31 117 aa16.76■□□□□ 0.27
CTSA-217ENST00000607482 ZNF99A8MXY4 864 aaPredicted RBP16.76■□□□□ 0.27
CTSA-217ENST00000607482 RPL36A-HNRNPH2H7BZ11 118 aa16.76■□□□□ 0.27
CTSA-217ENST00000607482 TRAF3IP2O43734 574 aaPredicted RBP16.76■□□□□ 0.27
CTSA-217ENST00000607482 NPRL3Q12980 569 aa16.76■□□□□ 0.27
CTSA-217ENST00000607482 CAMK2DQ13557 499 aa16.76■□□□□ 0.27
CTSA-217ENST00000607482 VHLLQ6RSH7 139 aa16.76■□□□□ 0.27
CTSA-217ENST00000607482 CLEC2AQ6UVW9 174 aa16.76■□□□□ 0.27
CTSA-217ENST00000607482 B3GLCTQ6Y288 498 aa16.76■□□□□ 0.27
CTSA-217ENST00000607482 ARPINQ7Z6K5 226 aa16.76■□□□□ 0.27
CTSA-217ENST00000607482 C20orf196Q8IYI0 205 aa16.76■□□□□ 0.27
CTSA-217ENST00000607482 POU5F2Q8N7G0 328 aa16.76■□□□□ 0.27
CTSA-217ENST00000607482 RP9Q8TA86 221 aaKnown RBP16.76■□□□□ 0.27
CTSA-217ENST00000607482 RCN3Q96D15 328 aa16.76■□□□□ 0.27
CTSA-217ENST00000607482 FBXO17Q96EF6 278 aa16.76■□□□□ 0.27
CTSA-217ENST00000607482 BOD1Q96IK1 185 aa16.76■□□□□ 0.27
CTSA-217ENST00000607482 KATNB1Q9BVA0 655 aa16.76■□□□□ 0.27
CTSA-217ENST00000607482 SLC19A3Q9BZV2 496 aa16.76■□□□□ 0.27
CTSA-217ENST00000607482 SEC14L2O76054 403 aa16.75■□□□□ 0.27
CTSA-217ENST00000607482 CD79AP11912 226 aa16.75■□□□□ 0.27
CTSA-217ENST00000607482 IFNGR1P15260 489 aa16.75■□□□□ 0.27
CTSA-217ENST00000607482 ARR3P36575 388 aa16.75■□□□□ 0.27
CTSA-217ENST00000607482 CSNK1A1P48729 337 aa16.75■□□□□ 0.27
CTSA-217ENST00000607482 GZMMP51124 257 aa16.75■□□□□ 0.27
CTSA-217ENST00000607482 BIDP55957 195 aa16.75■□□□□ 0.27
CTSA-217ENST00000607482 SNRPD2P62316 118 aaKnown RBP16.75■□□□□ 0.27
CTSA-217ENST00000607482 ZNF74Q16587 644 aa16.75■□□□□ 0.27
CTSA-217ENST00000607482 NANOGNBQ7Z5D8 188 aa16.75■□□□□ 0.27
CTSA-217ENST00000607482 CALHM3Q86XJ0 350 aa16.75■□□□□ 0.27
CTSA-217ENST00000607482 TMEM123Q8N131 208 aa16.75■□□□□ 0.27
CTSA-217ENST00000607482 OR4D11Q8NGI4 311 aa16.75■□□□□ 0.27
CTSA-217ENST00000607482 NANOS1Q8WY41 292 aaKnown RBP16.75■□□□□ 0.27
CTSA-217ENST00000607482 POM121Q96HA1 1249 aa16.75■□□□□ 0.27
CTSA-217ENST00000607482 TXNDC15Q96J42 360 aa16.75■□□□□ 0.27
CTSA-217ENST00000607482 LRR1Q96L50 414 aa16.75■□□□□ 0.27
CTSA-217ENST00000607482 ZNF583Q96ND8 569 aa16.75■□□□□ 0.27
CTSA-217ENST00000607482 REG4Q9BYZ8 158 aa16.75■□□□□ 0.27
CTSA-217ENST00000607482 ZNF229Q9UJW7 825 aa16.75■□□□□ 0.27
CTSA-217ENST00000607482 USP22Q9UPT9 525 aa16.75■□□□□ 0.27
CTSA-217ENST00000607482 ELOVL7A1L3X0 281 aa16.74■□□□□ 0.27
CTSA-217ENST00000607482 FAM220BPB1ANY3 271 aa16.74■□□□□ 0.27
CTSA-217ENST00000607482 BLOC1S5-TXNDC5H3BN57 136 aa16.74■□□□□ 0.27
CTSA-217ENST00000607482 FXYD1O00168 92 aa16.74■□□□□ 0.27
CTSA-217ENST00000607482 SHOX2O60902 331 aaPredicted RBP16.74■□□□□ 0.27
CTSA-217ENST00000607482 FZD7O75084 574 aa16.74■□□□□ 0.27
CTSA-217ENST00000607482 NDUFS7O75251 213 aa16.74■□□□□ 0.27
CTSA-217ENST00000607482 PCSK6P29122 969 aa16.74■□□□□ 0.27
CTSA-217ENST00000607482 SERPINF1P36955 418 aa16.74■□□□□ 0.27
CTSA-217ENST00000607482 OR1E2P47887 323 aa16.74■□□□□ 0.27
CTSA-217ENST00000607482 IDH3GP51553 393 aaPredicted RBP16.74■□□□□ 0.27
CTSA-217ENST00000607482 DSCR9P59020 149 aa16.74■□□□□ 0.27
CTSA-217ENST00000607482 CYBRD1Q53TN4 286 aa16.74■□□□□ 0.27
CTSA-217ENST00000607482 LINC00114Q6XXX2 140 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms