RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 GPR35Q9HC97 309 aa12.6□□□□□ -0.39
PKNOX1-210ENST00000607049 ARMCX1Q9P291 453 aa12.6□□□□□ -0.39
PKNOX1-210ENST00000607049 ZNF229Q9UJW7 825 aa12.6□□□□□ -0.39
PKNOX1-210ENST00000607049 POFUT2Q9Y2G5 429 aa12.6□□□□□ -0.39
PKNOX1-210ENST00000607049 A0A096LPE4 126 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 A0A1W2PPZ6 126 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 ELOVL7A1L3X0 281 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 TRIM64A6NGJ6 449 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 TRIM64BA6NI03 449 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 ZNF99A8MXY4 864 aaPredicted RBP12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 E7EQL1 145 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 MS4A18H0YCH9 400 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 M0R3G1 203 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 FXYD1O00168 92 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 KPNA4O00629 521 aaPredicted RBP12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 RNF13O43567 381 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 TRAF3IP2O43734 574 aaPredicted RBP12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 SERPINI2O75830 405 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 OR5F1O95221 314 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 CH25HO95992 272 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 APOBEC3AP31941 199 aaPredicted RBP12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 ARR3P36575 388 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 RBM34P42696 430 aaKnown RBP12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 LGALS3BPQ08380 585 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 ZNF74Q16587 644 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 CEACAM16Q2WEN9 425 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 MS4A18Q3C1V0 323 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 C3orf36Q3SXR2 165 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 CARD17Q5XLA6 110 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 LINC00114Q6XXX2 140 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 DEF8Q6ZN54 512 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 HDDC2Q7Z4H3 204 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 RBM45Q8IUH3 476 aaKnown RBP12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 IL17RDQ8NFM7 739 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 CMTM5Q96DZ9 223 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 TPD52L3Q96J77 140 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 ZNF583Q96ND8 569 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 WFDC6Q9BQY6 131 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 ULBP2Q9BZM5 246 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 GSX1Q9H4S2 264 aaPredicted RBP12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 FBXO9Q9UK97 447 aaPredicted RBP12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 USP22Q9UPT9 525 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 MOKQ9UQ07 419 aa12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 SETD2Q9BYW2 2564 aaPredicted RBP12.59□□□□□ -0.39
PKNOX1-210ENST00000607049 SLC35F4A4IF30 521 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 C11orf98E9PRG8 122 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 HEXAP06865 529 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 THRBP10828 461 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 COX4I1P13073 169 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 PTNP21246 168 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 KDELR2P33947 212 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 CSNK1A1P48729 337 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 NUDT6P53370 316 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 DSCR9P59020 149 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 SLC25A3Q00325 362 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 LTBQ06643 244 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 SPOCK1Q08629 439 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 CYBRD1Q53TN4 286 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 PRR14LQ5THK1 2151 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 SPATA21Q7Z572 469 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 NANOGNBQ7Z5D8 188 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 C20orf196Q8IYI0 205 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 MICU2Q8IYU8 434 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 TMEM123Q8N131 208 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 OR4F15Q8NGB8 312 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 RHNO1Q9BSD3 238 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 EMC6Q9BV81 110 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 CACNG6Q9BXT2 260 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 MED29Q9NX70 200 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 USF3Q68DE3 2245 aa12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 RAI1Q7Z5J4 1906 aaPredicted RBP12.58□□□□□ -0.4
PKNOX1-210ENST00000607049 CADP27708 2225 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 IGHV1-18A0A0C4DH31 117 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 HTR3EA5X5Y0 456 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 LRRN3E7EW58 273 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 ATP6V1G2-DDX39BF2Z307 99 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 GMNNO75496 209 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 HPRP00739 348 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 CD8AP01732 235 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 IFNGR1P15260 489 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 CBR1P16152 277 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 SNRPD2P62316 118 aaKnown RBP12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 SELENOWP63302 87 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 ST3GAL3Q11203 375 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 ZP4Q12836 540 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 CAMK2DQ13557 499 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 CLEC2AQ6UVW9 174 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 ZNF813Q6ZN06 617 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 SLC35D2Q76EJ3 337 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 LINGO2Q7L985 606 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 CPLX4Q7Z7G2 160 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 LSRQ86X29 649 aaPredicted RBP12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 POU5F2Q8N7G0 328 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 OR4D11Q8NGI4 311 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 ZNF566Q969W8 418 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 STX18Q9P2W9 335 aaKnown RBP12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 RIMS3Q9UJD0 308 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 FBXL3Q9UKT7 428 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 MED31Q9Y3C7 131 aa12.57□□□□□ -0.4
PKNOX1-210ENST00000607049 A0A1W2PRG6 482 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms