RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 TNFSF13O75888 250 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 VAMP5O95183 116 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 RCBTB2O95199 551 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 IL2RAP01589 272 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 YES1P07947 543 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 OSMP13725 252 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 IFNGR1P15260 489 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 ZNF43P17038 809 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 POU1F1P28069 291 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 EPHA2P29317 976 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 SLC6A6P31641 620 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 CEACAM8P31997 349 aaPredicted RBP6.82□□□□□ -1.32
MSH6-211ENST00000606499 NTF4P34130 210 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 TIMP3P35625 211 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 POLR2IP36954 125 aaKnown RBP6.82□□□□□ -1.32
MSH6-211ENST00000606499 KIR2DL2P43627 348 aaPredicted RBP6.82□□□□□ -1.32
MSH6-211ENST00000606499 SELENOPP49908 381 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 ALDH3A2P51648 485 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 BIDP55957 195 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 CLDN17P56750 224 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 CTXN1P60606 82 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 PRPS1P60891 318 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 ERVK-25P63136 954 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 ADORA2A-AS1P86434 159 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 LGALS3BPQ08380 585 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 COX10Q12887 443 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 C1DQ13901 141 aaKnown RBP6.82□□□□□ -1.32
MSH6-211ENST00000606499 PDK3Q15120 406 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 ACKR1Q16570 336 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 RFX4Q33E94 735 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 ZIK1Q3SY52 487 aaPredicted RBP6.82□□□□□ -1.32
MSH6-211ENST00000606499 ANKDD1AQ495B1 522 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 RIPPLY2Q5TAB7 128 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 VWA1Q6PCB0 445 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 CASP12Q6UXS9 341 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 NHLRC1Q6VVB1 395 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 SLC35D2Q76EJ3 337 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 FAM214BQ7L5A3 538 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 NUFIP2Q7Z417 695 aaKnown RBP6.82□□□□□ -1.32
MSH6-211ENST00000606499 PXKQ7Z7A4 578 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 CCDC71Q8IV32 467 aaPredicted RBP6.82□□□□□ -1.32
MSH6-211ENST00000606499 PARP8Q8N3A8 854 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 GALNT4Q8N4A0 578 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 IQCF1Q8N6M8 205 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 CLDN22Q8N7P3 220 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 ANKK1Q8NFD2 765 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 OR52L1Q8NGH7 329 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 OR4Q3Q8NH05 313 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 TEX47Q8TBZ9 253 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 DNAJC9Q8WXX5 260 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 RASD2Q96D21 266 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 CCDC120Q96HB5 630 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 TXNDC15Q96J42 360 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 GPX7Q96SL4 187 aaPredicted RBP6.82□□□□□ -1.32
MSH6-211ENST00000606499 MBOAT4Q96T53 435 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 EMC6Q9BV81 110 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 IFT27Q9BW83 186 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 SF3B5Q9BWJ5 86 aaKnown RBP6.82□□□□□ -1.32
MSH6-211ENST00000606499 POLDIP3Q9BY77 421 aaKnown RBP6.82□□□□□ -1.32
MSH6-211ENST00000606499 RIBC2Q9H4K1 309 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 BCO1Q9HAY6 547 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 NRIP3Q9NQ35 241 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 IL20Q9NYY1 176 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 USE1Q9NZ43 259 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 EMC3Q9P0I2 261 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 Q9UFV3 132 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 HELZ2Q9BYK8 2649 aaKnown RBP6.81□□□□□ -1.32
MSH6-211ENST00000606499 NBASA2RRP1 2371 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 LRBAP50851 2863 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 TEX13CA0A0J9YWL9 993 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 SLC35F4A4IF30 521 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 ZNF724A8MTY0 619 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 M0R129 80 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 DLGAP1O14490 977 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 BHLHE40O14503 412 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 GPR171O14626 319 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 SNAP29O95721 258 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 IGHV3-9P01782 118 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 IGHMP01871 453 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 CD14P08571 375 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 PLA2G2AP14555 144 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 BMP5P22003 454 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 DAP3P51398 398 aaKnown RBP6.81□□□□□ -1.32
MSH6-211ENST00000606499 RPL27P61353 136 aaKnown RBP6.81□□□□□ -1.32
MSH6-211ENST00000606499 RUNX1T1Q06455 604 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 DBPQ10586 325 aaPredicted RBP6.81□□□□□ -1.32
MSH6-211ENST00000606499 CAMK2DQ13557 499 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 KRR1Q13601 381 aaKnown RBP6.81□□□□□ -1.32
MSH6-211ENST00000606499 TAF11Q15544 211 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 PGGHGQ32M88 737 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 C4orf17Q53FE4 359 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 MESTQ5EB52 335 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 TMEM201Q5SNT2 666 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 SLC35F1Q5T1Q4 408 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 ARMC4Q5T2S8 1044 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 TMEM236Q5W0B7 351 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 CARD17Q5XLA6 110 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 CRYBG3Q68DQ2 2970 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 GTF2IRD2BQ6EKJ0 949 aa6.81□□□□□ -1.32
MSH6-211ENST00000606499 RPL13AP3Q6NVV1 102 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms