RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 BCL6BQ8N143 479 aaPredicted RBP13.1□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 DENND2DQ9H6A0 471 aaPredicted RBP13.1□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 SLCO1C1Q9NYB5 712 aa13.1□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 FBXL3Q9UKT7 428 aa13.1□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 AUP1Q9Y679 476 aa13.1□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 PPIAL4EA0A075B759 164 aa13.09□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 PPIAL4CA0A0B4J2A2 164 aa13.09□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 AGAP5A6NIR3 686 aa13.09□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 PPIAL4DF5H284 164 aa13.09□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 RNASET2O00584 256 aaKnown RBP13.09□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 FOXH1O75593 365 aa13.09□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 MT-ND5P03915 603 aa13.09□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 PPIAL4FP0DN26 164 aa13.09□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 NCF2P19878 526 aaPredicted RBP13.09□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 RAB1AP62820 205 aa13.09□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 SRSF4Q08170 494 aaKnown RBP13.09□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 CAMK2DQ13557 499 aa13.09□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 C6orf136Q5SQH8 315 aa13.09□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 MFSD8Q8NHS3 518 aa13.09□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 ZNF48Q96MX3 618 aaPredicted RBP13.09□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 OXGR1Q96P68 337 aa13.09□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 SAP30LQ9HAJ7 183 aa13.09□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 BEX1Q9HBH7 125 aa13.09□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 B3GAT2Q9NPZ5 323 aa13.09□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 NKIRAS2Q9NYR9 191 aa13.09□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 MARCOQ9UEW3 520 aaPredicted RBP13.09□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 PRDM4Q9UKN5 801 aa13.09□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 POFUT2Q9Y2G5 429 aa13.09□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 MMP24Q9Y5R2 645 aa13.09□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 CPSF4O95639 269 aaKnown RBP13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 CLPTM1O96005 669 aa13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 FGF4P08620 206 aa13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 ABHD2P08910 425 aa13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 GKN3PP0CG01 181 aa13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 RPS5P46782 204 aaKnown RBP13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 MTNR1AP48039 350 aa13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 CHI3L2Q15782 390 aa13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 SYPL1Q16563 259 aa13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 TUSC1Q2TAM9 212 aa13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 UGT3A2Q3SY77 523 aa13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 CARD17Q5XLA6 110 aa13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 ATG16L1Q676U5 607 aa13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 C16orf87Q6PH81 154 aa13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 ZNF572Q7Z3I7 529 aaPredicted RBP13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 SNX32Q86XE0 403 aa13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 C10orf107Q8IVU9 208 aa13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 DEFB108BQ8NET1 73 aa13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 VPS37AQ8NEZ2 397 aa13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 SYNPRQ8TBG9 265 aa13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 AGR3Q8TD06 166 aa13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 WFDC12Q8WWY7 111 aa13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 CCL17Q92583 94 aa13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 TRIM44Q96DX7 344 aaPredicted RBP13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 TRNT1Q96Q11 434 aaKnown RBP13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 OR2M2Q96R28 347 aa13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 MRI1Q9BV20 369 aa13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 GATA5Q9BWX5 397 aaPredicted RBP13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 MTHFD2LQ9H903 347 aaPredicted RBP13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 PURGQ9UJV8 347 aaKnown RBP13.08□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 A0A1W2PPM1 405 aa13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 HMGN4O00479 90 aa13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 UBL3O95164 117 aa13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 GPANK1O95872 356 aa13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 CRYBA1P05813 215 aa13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 DBIP07108 87 aaKnown RBP13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 FAM157BP0CG42 384 aa13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 G6PDP11413 515 aa13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 B4GALT1P15291 398 aa13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 CKAP4Q07065 602 aaKnown RBP13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 SLC3A1Q07837 685 aa13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 MAD2L1Q13257 205 aaPredicted RBP13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 RAB39AQ14964 217 aa13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 MOGQ16653 247 aa13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 TSTQ16762 297 aaKnown RBP13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 XKR7Q5GH72 579 aa13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 ZNF362Q5T0B9 420 aaPredicted RBP13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 LRRC74BQ6ZQY2 392 aa13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 C1QL4Q86Z23 238 aa13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 KIR3DL3Q8N743 410 aa13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 ANKFN1Q8N957 763 aa13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 STK35Q8TDR2 534 aa13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 ELMOD3Q96FG2 381 aa13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 ZNF75AQ96N20 296 aa13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 SLC38A1Q9H2H9 487 aa13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 RLIMQ9NVW2 624 aa13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 CACNG2Q9Y698 323 aa13.07□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 PRAMEF27A3QJZ7 478 aa13.06□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 AIM2O14862 343 aa13.06□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 TRAF3IP2O43734 574 aaPredicted RBP13.06□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 TRIM13O60858 407 aa13.06□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 LCKP06239 509 aa13.06□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 CHRNGP07510 517 aa13.06□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 DRD4P21917 467 aa13.06□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 ANXA11P50995 505 aaKnown RBP13.06□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 AQP5P55064 265 aa13.06□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 CLDN8P56748 225 aa13.06□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 RBBP4Q09028 425 aa13.06□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 ZNF154Q13106 437 aa13.06□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 MFSD13AQ14CX5 517 aa13.06□□□□□ -0.32
NEDD8-MDP1-204ENST00000605847 ANKRD46Q86W74 232 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms