RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 RBM38Q9H0Z9 239 aaKnown RBP3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 HIPK2Q9H2X6 1198 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 PSTPIP2Q9H939 334 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 UGT1A10Q9HAW8 530 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 NMRAL1Q9HBL8 299 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 POPDC2Q9HBU9 364 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 CSNK1G1Q9HCP0 422 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 ZNF334Q9HCZ1 680 aaPredicted RBP3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 UBE2TQ9NPD8 197 aaPredicted RBP3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 ZNF302Q9NR11 478 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 ADAM22Q9P0K1 906 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 TCF19Q9Y242 345 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 PPP2R2CQ9Y2T4 447 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 RBMX2Q9Y388 322 aaKnown RBP3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 GMPPBQ9Y5P6 360 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 ALG6Q9Y672 507 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 CACNA1EQ15878 2313 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 LOC400499M0QZD8 3231 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 PLXNB3Q9ULL4 1909 aa3.31□□□□□ -1.88
IGHV3-29-201ENST00000604817 USP9XQ93008 2570 aaPredicted RBP3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 NID2Q14112 1375 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 IGLV5-45A0A087WSX0 123 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 NPIPA5A0A0B4J1W7 369 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 KBTBD11-OT1A0A1B0GTJ5 212 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 PLSCR5A0PG75 271 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 BCLAF3A2AJT9 711 aaKnown RBP3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 VPS37CA5D8V6 355 aaPredicted RBP3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 SMCO2A6NFE2 343 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 NPIPA5E9PKD4 350 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 ZNF195O14628 629 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 CCL16O15467 120 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 CHST1O43916 411 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 NDUFS6O75380 124 aaKnown RBP3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 JCHAINP01591 159 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 PIGRP01833 764 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 SERPIND1P05546 499 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 BCKDHAP12694 445 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 LIFP15018 202 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 ZNF24P17028 368 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 C4BPBP20851 252 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 CCNE1P24864 410 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 GIFP27352 417 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 GNA11P29992 359 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 RPL4P36578 427 aaKnown RBP3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 MMP12P39900 470 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 ID1P41134 155 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 SOX3P41225 446 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 ZFP36L2P47974 494 aaKnown RBP3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 ATP5J2P56134 94 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 KRTAP10-7P60409 375 aaPredicted RBP3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 UBE2IP63279 158 aaKnown RBP3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 TNNC1P63316 161 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 GAGE5Q13069 117 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 GAGE6Q13070 117 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 GPR17Q13304 367 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 P2RY6Q15077 328 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 USF2Q15853 346 aaPredicted RBP3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 KLHL38Q2WGJ6 581 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 MS4A18Q3C1V0 323 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 VPS26BQ4G0F5 336 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 DMRTC1Q5HYR2 192 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 SIRPB2Q5JXA9 342 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 C6orf183Q5T699 404 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 CCDC137Q6PK04 289 aaKnown RBP3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 SLC25A47Q6Q0C1 308 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 Q6ZSR3 168 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 NIPA1Q7RTP0 329 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 CMTM8Q8IZV2 173 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 PELI3Q8N2H9 469 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 OR4A4PQ8NGN8 299 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 LNX1Q8TBB1 728 aaPredicted RBP3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 SMAP2Q8WU79 429 aaPredicted RBP3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 MAIP1Q8WWC4 291 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 KIFAP3Q92845 792 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 MRGPRFQ96AM1 343 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 C2orf48Q96LS8 159 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 FAM218AQ96MZ4 157 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 ZNF385AQ96PM9 386 aaKnown RBP3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 TSSK3Q96PN8 268 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 KCNA7Q96RP8 456 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 CNN2Q99439 309 aaKnown RBP3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 PSD2Q9BQI7 771 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 RHNO1Q9BSD3 238 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 TM6SF2Q9BZW4 377 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 RAB1BQ9H0U4 201 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 GLIPR2Q9H4G4 154 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 RANBP3Q9H6Z4 567 aaPredicted RBP3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 GAREM1Q9H706 876 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 FKRPQ9H9S5 495 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 Q9HAA7 133 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 C6orf50Q9HD87 102 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 TMEM9BQ9NQ34 198 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 DYRK4Q9NR20 520 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 CLN8Q9UBY8 286 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 GGA2Q9UJY4 613 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 KLK13Q9UKR3 277 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 SCML2Q9UQR0 700 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 DHRS7Q9Y394 339 aa3.3□□□□□ -1.88
IGHV3-29-201ENST00000604817 AK6Q9Y3D8 172 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms