RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 B3GAT1Q9P2W7 334 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 ZNF346Q9UL40 294 aaKnown RBP16.6■□□□□ 0.25
SSBP4-212ENST00000601919 ZNF175Q9Y473 711 aa16.6■□□□□ 0.25
SSBP4-212ENST00000601919 IGHV3-15A0A0B4J1V0 119 aa16.59■□□□□ 0.25
SSBP4-212ENST00000601919 SH3D21A4FU49 640 aa16.59■□□□□ 0.25
SSBP4-212ENST00000601919 AHRRA9YTQ3 701 aa16.59■□□□□ 0.25
SSBP4-212ENST00000601919 PRKYO43930 277 aa16.59■□□□□ 0.25
SSBP4-212ENST00000601919 CYTIPO60759 359 aa16.59■□□□□ 0.25
SSBP4-212ENST00000601919 IFNGR1P15260 489 aa16.59■□□□□ 0.25
SSBP4-212ENST00000601919 HIST1H1CP16403 213 aaKnown RBP16.59■□□□□ 0.25
SSBP4-212ENST00000601919 ACVR2AP27037 513 aa16.59■□□□□ 0.25
SSBP4-212ENST00000601919 ACVR1BP36896 505 aa16.59■□□□□ 0.25
SSBP4-212ENST00000601919 EFNB1P98172 346 aa16.59■□□□□ 0.25
SSBP4-212ENST00000601919 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.59■□□□□ 0.25
SSBP4-212ENST00000601919 ABLIM2Q6H8Q1 611 aa16.59■□□□□ 0.25
SSBP4-212ENST00000601919 OR4K13Q8NH42 304 aa16.59■□□□□ 0.25
SSBP4-212ENST00000601919 HDAC2Q92769 488 aaKnown RBP16.59■□□□□ 0.25
SSBP4-212ENST00000601919 RFKQ969G6 155 aa16.59■□□□□ 0.25
SSBP4-212ENST00000601919 Q96M85 177 aa16.59■□□□□ 0.25
SSBP4-212ENST00000601919 ADAD1Q96M93 576 aaKnown RBP16.59■□□□□ 0.25
SSBP4-212ENST00000601919 SNX18Q96RF0 628 aa16.59■□□□□ 0.25
SSBP4-212ENST00000601919 YTHDF1Q9BYJ9 559 aaKnown RBP16.59■□□□□ 0.25
SSBP4-212ENST00000601919 UBAP1Q9NZ09 502 aa16.59■□□□□ 0.25
SSBP4-212ENST00000601919 BLOC1S6Q9UL45 172 aa16.59■□□□□ 0.25
SSBP4-212ENST00000601919 ACACBO00763 2458 aa16.58■□□□□ 0.25
SSBP4-212ENST00000601919 ZNF814B7Z6K7 855 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 PRR23D1E9PI22 279 aaPredicted RBP16.58■□□□□ 0.24
SSBP4-212ENST00000601919 AHCYL1O43865 530 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 RENP00797 406 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 PRR23D2P0DMB1 279 aaPredicted RBP16.58■□□□□ 0.24
SSBP4-212ENST00000601919 GABRB1P18505 474 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 PTGS2P35354 604 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 CHN2P52757 468 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 SLC16A1P53985 500 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 MLLT10P55197 1068 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 CXCR4P61073 352 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 RASGEF1BQ0VAM2 473 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 SLC17A1Q14916 467 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 PON3Q15166 354 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 RNPS1Q15287 305 aaKnown RBP16.58■□□□□ 0.24
SSBP4-212ENST00000601919 OCLNQ16625 522 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 ST3GAL2Q16842 350 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 RBM48Q5RL73 367 aaKnown RBP16.58■□□□□ 0.24
SSBP4-212ENST00000601919 TMEM201Q5SNT2 666 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 C6orf141Q5SZD1 244 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 GID4Q8IVV7 300 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 ZNF786Q8N393 782 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 OR9K2Q8NGE7 335 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 ZNF519Q8TB69 540 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 CNIH3Q8TBE1 160 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 ASB10Q8WXI3 467 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 ROBO4Q8WZ75 1007 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 UBE2FQ969M7 185 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 RASD2Q96D21 266 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 LRR1Q96L50 414 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 CNTNAP3BQ96NU0 1288 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 TUBA1CQ9BQE3 449 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 CNTNAP3Q9BZ76 1288 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 EMC3Q9P0I2 261 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 KLHL9Q9P2J3 617 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 KLHL13Q9P2N7 655 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 TNFRSF10DQ9UBN6 386 aa16.58■□□□□ 0.24
SSBP4-212ENST00000601919 SLC22A20A6NK97 555 aa16.57■□□□□ 0.24
SSBP4-212ENST00000601919 ZNF726A6NNF4 738 aa16.57■□□□□ 0.24
SSBP4-212ENST00000601919 CLCA1A8K7I4 914 aa16.57■□□□□ 0.24
SSBP4-212ENST00000601919 M0R129 80 aa16.57■□□□□ 0.24
SSBP4-212ENST00000601919 GPR171O14626 319 aa16.57■□□□□ 0.24
SSBP4-212ENST00000601919 ARHGEF9O43307 516 aa16.57■□□□□ 0.24
SSBP4-212ENST00000601919 TRAF3IP2O43734 574 aaPredicted RBP16.57■□□□□ 0.24
SSBP4-212ENST00000601919 NR2C1P13056 603 aa16.57■□□□□ 0.24
SSBP4-212ENST00000601919 HLA-DOBP13765 273 aa16.57■□□□□ 0.24
SSBP4-212ENST00000601919 PTGER4P35408 488 aa16.57■□□□□ 0.24
SSBP4-212ENST00000601919 ITGADQ13349 1161 aa16.57■□□□□ 0.24
SSBP4-212ENST00000601919 C3AR1Q16581 482 aa16.57■□□□□ 0.24
SSBP4-212ENST00000601919 ARMC4Q5T2S8 1044 aa16.57■□□□□ 0.24
SSBP4-212ENST00000601919 EEF1A1P5Q5VTE0 462 aa16.57■□□□□ 0.24
SSBP4-212ENST00000601919 LEG1Q6P5S2 330 aa16.57■□□□□ 0.24
SSBP4-212ENST00000601919 CREB3L2Q70SY1 520 aa16.57■□□□□ 0.24
SSBP4-212ENST00000601919 CXXC5Q7LFL8 322 aaKnown RBP16.57■□□□□ 0.24
SSBP4-212ENST00000601919 MCEMP1Q8IX19 187 aa16.57■□□□□ 0.24
SSBP4-212ENST00000601919 SLC37A3Q8NCC5 494 aa16.57■□□□□ 0.24
SSBP4-212ENST00000601919 OR6X1Q8NH79 312 aa16.57■□□□□ 0.24
SSBP4-212ENST00000601919 RNF128Q8TEB7 428 aa16.57■□□□□ 0.24
SSBP4-212ENST00000601919 OTULINQ96BN8 352 aa16.57■□□□□ 0.24
SSBP4-212ENST00000601919 SNRNP40Q96DI7 357 aaKnown RBP16.57■□□□□ 0.24
SSBP4-212ENST00000601919 SLX1AQ9BQ83 275 aa16.57■□□□□ 0.24
SSBP4-212ENST00000601919 SCN3BQ9NY72 215 aa16.57■□□□□ 0.24
SSBP4-212ENST00000601919 MYRFQ9Y2G1 1151 aa16.57■□□□□ 0.24
SSBP4-212ENST00000601919 GPR52Q9Y2T5 361 aa16.57■□□□□ 0.24
SSBP4-212ENST00000601919 TTLL8A6PVC2 850 aa16.56■□□□□ 0.24
SSBP4-212ENST00000601919 CENPBD1B2RD01 187 aa16.56■□□□□ 0.24
SSBP4-212ENST00000601919 RAMP1O60894 148 aa16.56■□□□□ 0.24
SSBP4-212ENST00000601919 WBP4O75554 376 aaKnown RBP16.56■□□□□ 0.24
SSBP4-212ENST00000601919 TNFAIP8O95379 198 aa16.56■□□□□ 0.24
SSBP4-212ENST00000601919 SLC2A10O95528 541 aa16.56■□□□□ 0.24
SSBP4-212ENST00000601919 CCDC159P0C7I6 412 aa16.56■□□□□ 0.24
SSBP4-212ENST00000601919 GABRA1P14867 456 aa16.56■□□□□ 0.24
SSBP4-212ENST00000601919 BIDP55957 195 aa16.56■□□□□ 0.24
SSBP4-212ENST00000601919 LGALS3BPQ08380 585 aa16.56■□□□□ 0.24
SSBP4-212ENST00000601919 CRMP1Q14194 572 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms