RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 B3GAT1Q9P2W7 334 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 LHX6Q9UPM6 363 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 LOC102725191A0A1B0GVB3 256 aa20.2■□□□□ 0.82
IRF3-228ENST00000601291 CLCA1A8K7I4 914 aa20.2■□□□□ 0.82
IRF3-228ENST00000601291 BCL10O95999 233 aa20.2■□□□□ 0.82
IRF3-228ENST00000601291 HLA-DOBP13765 273 aa20.2■□□□□ 0.82
IRF3-228ENST00000601291 ACVR1BP36896 505 aa20.2■□□□□ 0.82
IRF3-228ENST00000601291 CDH11P55287 796 aa20.2■□□□□ 0.82
IRF3-228ENST00000601291 CLDN15P56746 228 aa20.2■□□□□ 0.82
IRF3-228ENST00000601291 C1DQ13901 141 aaKnown RBP20.2■□□□□ 0.82
IRF3-228ENST00000601291 MESTQ5EB52 335 aa20.2■□□□□ 0.82
IRF3-228ENST00000601291 LEG1Q6P5S2 330 aa20.2■□□□□ 0.82
IRF3-228ENST00000601291 SLC35D2Q76EJ3 337 aa20.2■□□□□ 0.82
IRF3-228ENST00000601291 CYB561A3Q8NBI2 242 aa20.2■□□□□ 0.82
IRF3-228ENST00000601291 NMNAT3Q96T66 252 aa20.2■□□□□ 0.82
IRF3-228ENST00000601291 PSORS1C1Q9UIG5 152 aa20.2■□□□□ 0.82
IRF3-228ENST00000601291 A0A087WXM4 84 aa20.19■□□□□ 0.82
IRF3-228ENST00000601291 EFCAB10A6NFE3 127 aa20.19■□□□□ 0.82
IRF3-228ENST00000601291 A6NIZ1 184 aa20.19■□□□□ 0.82
IRF3-228ENST00000601291 ZNF814B7Z6K7 855 aa20.19■□□□□ 0.82
IRF3-228ENST00000601291 CRYABP02511 175 aaKnown RBP20.19■□□□□ 0.82
IRF3-228ENST00000601291 IFNGR1P15260 489 aa20.19■□□□□ 0.82
IRF3-228ENST00000601291 ZNF43P17038 809 aa20.19■□□□□ 0.82
IRF3-228ENST00000601291 RAP1BP61224 184 aa20.19■□□□□ 0.82
IRF3-228ENST00000601291 RAP1AP62834 184 aa20.19■□□□□ 0.82
IRF3-228ENST00000601291 SLC35A2P78381 396 aa20.19■□□□□ 0.82
IRF3-228ENST00000601291 SRYQ05066 204 aa20.19■□□□□ 0.82
IRF3-228ENST00000601291 ZNF91Q05481 1191 aa20.19■□□□□ 0.82
IRF3-228ENST00000601291 NIPAL3Q6P499 406 aa20.19■□□□□ 0.82
IRF3-228ENST00000601291 TMEM154Q6P9G4 183 aa20.19■□□□□ 0.82
IRF3-228ENST00000601291 AHSA2Q719I0 299 aa20.19■□□□□ 0.82
IRF3-228ENST00000601291 HDDC2Q7Z4H3 204 aa20.19■□□□□ 0.82
IRF3-228ENST00000601291 ZNF519Q8TB69 540 aa20.19■□□□□ 0.82
IRF3-228ENST00000601291 TAAR6Q96RI8 345 aa20.19■□□□□ 0.82
IRF3-228ENST00000601291 MRPS26Q9BYN8 205 aaKnown RBP20.19■□□□□ 0.82
IRF3-228ENST00000601291 TSPAN10Q9H1Z9 355 aaPredicted RBP20.19■□□□□ 0.82
IRF3-228ENST00000601291 CNOT2Q9NZN8 540 aaKnown RBP20.19■□□□□ 0.82
IRF3-228ENST00000601291 CACNA1AO00555 2505 aa20.19■□□□□ 0.82
IRF3-228ENST00000601291 IGHV3-15A0A0B4J1V0 119 aa20.18■□□□□ 0.82
IRF3-228ENST00000601291 RENP00797 406 aa20.18■□□□□ 0.82
IRF3-228ENST00000601291 FAM87AP0C7U9 286 aa20.18■□□□□ 0.82
IRF3-228ENST00000601291 DBTP11182 482 aaKnown RBP20.18■□□□□ 0.82
IRF3-228ENST00000601291 MELKQ14680 651 aa20.18■□□□□ 0.82
IRF3-228ENST00000601291 PLEKHN1Q494U1 663 aaPredicted RBP20.18■□□□□ 0.82
IRF3-228ENST00000601291 NPEPL1Q8NDH3 523 aa20.18■□□□□ 0.82
IRF3-228ENST00000601291 BBS1Q8NFJ9 593 aa20.18■□□□□ 0.82
IRF3-228ENST00000601291 GGHQ92820 318 aa20.18■□□□□ 0.82
IRF3-228ENST00000601291 MYDGFQ969H8 173 aa20.18■□□□□ 0.82
IRF3-228ENST00000601291 PNPLA2Q96AD5 504 aa20.18■□□□□ 0.82
IRF3-228ENST00000601291 UCN2Q96RP3 112 aa20.18■□□□□ 0.82
IRF3-228ENST00000601291 COPS4Q9BT78 406 aa20.18■□□□□ 0.82
IRF3-228ENST00000601291 DUSP21Q9H596 190 aa20.18■□□□□ 0.82
IRF3-228ENST00000601291 MED20Q9H944 212 aa20.18■□□□□ 0.82
IRF3-228ENST00000601291 FRYQ5TBA9 3013 aa20.18■□□□□ 0.82
IRF3-228ENST00000601291 SMAD9O15198 467 aaKnown RBP20.17■□□□□ 0.82
IRF3-228ENST00000601291 ARHGEF9O43307 516 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 PIPP12273 146 aaPredicted RBP20.17■□□□□ 0.82
IRF3-228ENST00000601291 HTR1FP30939 366 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 CDKN2AP42771 156 aaKnown RBP20.17■□□□□ 0.82
IRF3-228ENST00000601291 CDH15P55291 814 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 POU4F3Q15319 338 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 LINC00303Q3SY05 128 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 KLHL12Q53G59 568 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 ARMC4Q5T2S8 1044 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 ZNF773Q6PK81 442 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 SIAH3Q8IW03 269 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 KDF1Q8NAX2 398 aaPredicted RBP20.17■□□□□ 0.82
IRF3-228ENST00000601291 ASB10Q8WXI3 467 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 PTP4A1Q93096 173 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 SNX18Q96RF0 628 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 TIMP4Q99727 224 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 SF3B5Q9BWJ5 86 aaKnown RBP20.17■□□□□ 0.82
IRF3-228ENST00000601291 HCAR1Q9BXC0 346 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 ZNF71Q9NQZ8 489 aaPredicted RBP20.17■□□□□ 0.82
IRF3-228ENST00000601291 PAK1IP1Q9NWT1 392 aaPredicted RBP20.17■□□□□ 0.82
IRF3-228ENST00000601291 SPRR3Q9UBC9 169 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 SNX5Q9Y5X3 404 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 A0A1B0GVC2 190 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 IRGMA1A4Y4 181 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 SLC22A31A6NKX4 558 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 NPIPA2E9PIF3 369 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 NPIPA3F8WFD2 350 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 RGS10O43665 173 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 MRPS14O60783 128 aaKnown RBP20.17■□□□□ 0.82
IRF3-228ENST00000601291 RAMP1O60894 148 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 SYNGR4O95473 234 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 SMIM18P0DKX4 95 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 CPN1P15169 458 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 ATP6V1B1P15313 513 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 KLK2P20151 261 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 MTNR1AP48039 350 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 RPS7P62081 194 aaKnown RBP20.17■□□□□ 0.82
IRF3-228ENST00000601291 LGALS3BPQ08380 585 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 MEPCEQ7L2J0 689 aaKnown RBP20.17■□□□□ 0.82
IRF3-228ENST00000601291 CHMP1BQ7LBR1 199 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 STX19Q8N4C7 294 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 RHNO1Q9BSD3 238 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 CCDC90BQ9GZT6 254 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 OR51V1Q9H2C8 321 aa20.17■□□□□ 0.82
IRF3-228ENST00000601291 FKBP14Q9NWM8 211 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms