RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	RPL18	Q07020	188 aa	Known RBP	19.54	■□□□□ 0.72
LTBP4-227	ENST00000600026	KIF18B	Q86Y91	864 aa		19.54	■□□□□ 0.72
LTBP4-227	ENST00000600026	MCEMP1	Q8IX19	187 aa		19.54	■□□□□ 0.72
LTBP4-227	ENST00000600026	ZNF808	Q8N4W9	903 aa	Predicted RBP	19.54	■□□□□ 0.72
LTBP4-227	ENST00000600026	MOSPD2	Q8NHP6	518 aa		19.54	■□□□□ 0.72
LTBP4-227	ENST00000600026	ASB5	Q8WWX0	329 aa		19.54	■□□□□ 0.72
LTBP4-227	ENST00000600026	SAMD8	Q96LT4	415 aa		19.54	■□□□□ 0.72
LTBP4-227	ENST00000600026	RIBC2	Q9H4K1	309 aa		19.54	■□□□□ 0.72
LTBP4-227	ENST00000600026	EGLN3	Q9H6Z9	239 aa		19.54	■□□□□ 0.72
LTBP4-227	ENST00000600026	TAS2R5	Q9NYW4	299 aa		19.54	■□□□□ 0.72
LTBP4-227	ENST00000600026	PCNX1	Q96RV3	2341 aa		19.54	■□□□□ 0.72
LTBP4-227	ENST00000600026	INTS1	Q8N201	2190 aa	Known RBP	19.54	■□□□□ 0.72
LTBP4-227	ENST00000600026	COL12A1	Q99715	3063 aa		19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026		A0A1W2PNV4	684 aa		19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026	MS4A18	H0YCH9	400 aa		19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026	RAMP1	O60894	148 aa		19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026	TP53	P04637	393 aa	Predicted RBP	19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026	CTSS	P25774	331 aa		19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026	CHRNB4	P30926	498 aa		19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026	NPRL3	Q12980	569 aa		19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026	FHL1	Q13642	323 aa		19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026	RNPS1	Q15287	305 aa	Known RBP	19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026	GUSBP1	Q15486	140 aa		19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026	MS4A18	Q3C1V0	323 aa		19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026	ZIK1	Q3SY52	487 aa	Predicted RBP	19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026	GTF2IRD2B	Q6EKJ0	949 aa		19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026	GTF2IRD2	Q86UP8	949 aa		19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026	LIX1L	Q8IVB5	337 aa		19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026	CCDC103	Q8IW40	242 aa		19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026	ANKK1	Q8NFD2	765 aa		19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026	GMPPA	Q96IJ6	420 aa	Predicted RBP	19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026	OXGR1	Q96P68	337 aa		19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026	SF3B5	Q9BWJ5	86 aa	Known RBP	19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026	TSSK6	Q9BXA6	273 aa		19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026	GABARAPL3	Q9BY60	117 aa		19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026	TOR3A	Q9H497	397 aa		19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026	INIP	Q9NRY2	104 aa		19.53	■□□□□ 0.72
LTBP4-227	ENST00000600026	SS18L1	O75177	396 aa	Predicted RBP	19.52	■□□□□ 0.72
LTBP4-227	ENST00000600026	PLG	P00747	810 aa	Predicted RBP	19.52	■□□□□ 0.72
LTBP4-227	ENST00000600026	CRH	P06850	196 aa		19.52	■□□□□ 0.72
LTBP4-227	ENST00000600026	AGA	P20933	346 aa		19.52	■□□□□ 0.72
LTBP4-227	ENST00000600026	P2RY4	P51582	365 aa		19.52	■□□□□ 0.72
LTBP4-227	ENST00000600026	SIRPA	P78324	504 aa		19.52	■□□□□ 0.72
LTBP4-227	ENST00000600026	RASGEF1B	Q0VAM2	473 aa		19.52	■□□□□ 0.72
LTBP4-227	ENST00000600026	C1D	Q13901	141 aa	Known RBP	19.52	■□□□□ 0.72
LTBP4-227	ENST00000600026	CDSN	Q15517	529 aa		19.52	■□□□□ 0.72
LTBP4-227	ENST00000600026	DPY19L2P2	Q6ZN68	376 aa		19.52	■□□□□ 0.72
LTBP4-227	ENST00000600026	PXK	Q7Z7A4	578 aa		19.52	■□□□□ 0.72
LTBP4-227	ENST00000600026	GPAT4	Q86UL3	456 aa		19.52	■□□□□ 0.72
LTBP4-227	ENST00000600026	UEVLD	Q8IX04	471 aa		19.52	■□□□□ 0.72
LTBP4-227	ENST00000600026	IFT27	Q9BW83	186 aa		19.52	■□□□□ 0.72
LTBP4-227	ENST00000600026	SFXN3	Q9BWM7	321 aa		19.52	■□□□□ 0.72
LTBP4-227	ENST00000600026	FANCF	Q9NPI8	374 aa		19.52	■□□□□ 0.72
LTBP4-227	ENST00000600026	GLRX2	Q9NS18	164 aa		19.52	■□□□□ 0.72
LTBP4-227	ENST00000600026	KLHL9	Q9P2J3	617 aa		19.52	■□□□□ 0.72
LTBP4-227	ENST00000600026	KLHL13	Q9P2N7	655 aa		19.52	■□□□□ 0.72
LTBP4-227	ENST00000600026	ING1	Q9UK53	422 aa	Predicted RBP	19.52	■□□□□ 0.72
LTBP4-227	ENST00000600026	NOX1	Q9Y5S8	564 aa		19.52	■□□□□ 0.72
LTBP4-227	ENST00000600026	LOC102725191	A0A1B0GVB3	256 aa		19.51	■□□□□ 0.71
LTBP4-227	ENST00000600026		A0A1W2PRG6	482 aa		19.51	■□□□□ 0.71
LTBP4-227	ENST00000600026	TNFSF13	O75888	250 aa		19.51	■□□□□ 0.71
LTBP4-227	ENST00000600026	SNAP29	O95721	258 aa		19.51	■□□□□ 0.71
LTBP4-227	ENST00000600026	IGFBP1	P08833	259 aa	Predicted RBP	19.51	■□□□□ 0.71
LTBP4-227	ENST00000600026	ZNF43	P17038	809 aa		19.51	■□□□□ 0.71
LTBP4-227	ENST00000600026	FXYD6P3	P58550	94 aa		19.51	■□□□□ 0.71
LTBP4-227	ENST00000600026	CTXN1	P60606	82 aa		19.51	■□□□□ 0.71
LTBP4-227	ENST00000600026	XKRX	Q6PP77	449 aa		19.51	■□□□□ 0.71
LTBP4-227	ENST00000600026	IZUMO2	Q6UXV1	221 aa		19.51	■□□□□ 0.71
LTBP4-227	ENST00000600026	THSD4	Q6ZMP0	1018 aa		19.51	■□□□□ 0.71
LTBP4-227	ENST00000600026	KDM8	Q8N371	416 aa		19.51	■□□□□ 0.71
LTBP4-227	ENST00000600026	CNEP1R1	Q8N9A8	125 aa		19.51	■□□□□ 0.71
LTBP4-227	ENST00000600026	RELL2	Q8NC24	303 aa	Predicted RBP	19.51	■□□□□ 0.71
LTBP4-227	ENST00000600026	ZNF555	Q8NEP9	628 aa		19.51	■□□□□ 0.71
LTBP4-227	ENST00000600026	GPX7	Q96SL4	187 aa	Predicted RBP	19.51	■□□□□ 0.71
LTBP4-227	ENST00000600026	TEX12	Q9BXU0	123 aa		19.51	■□□□□ 0.71
LTBP4-227	ENST00000600026	PLA2G12A	Q9BZM1	189 aa		19.51	■□□□□ 0.71
LTBP4-227	ENST00000600026	IL20RA	Q9UHF4	553 aa		19.51	■□□□□ 0.71
LTBP4-227	ENST00000600026	BAIAP2	Q9UQB8	552 aa		19.51	■□□□□ 0.71
LTBP4-227	ENST00000600026	ZNF716	A6NP11	495 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	MCIDAS	D6RGH6	385 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	DVL2	O14641	736 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	SERPINI2	O75830	405 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	IL18BP	O95998	194 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	F13B	P05160	661 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	CD14	P08571	375 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	BMP5	P22003	454 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	AGTR1	P30556	359 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	OPRM1	P35372	400 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	KIR2DL2	P43627	348 aa	Predicted RBP	19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	HSPA13	P48723	471 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	RPS6KA3	P51812	740 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	AQP4	P55087	323 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	POU3F1	Q03052	451 aa	Predicted RBP	19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	GINS1	Q14691	196 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	PDK3	Q15120	406 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	POU4F3	Q15319	338 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	CLEC12A	Q5QGZ9	265 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	SLC27A4	Q6P1M0	643 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	VWA1	Q6PCB0	445 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	FAM214B	Q7L5A3	538 aa		19.5	■□□□□ 0.71

Retrieved 100 of 20,778 RNA–protein pairs in 53 ms