RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 HLA-DOBP13765 273 aa13.07□□□□□ -0.32
VRK3-217ENST00000599538 CD53P19397 219 aa13.07□□□□□ -0.32
VRK3-217ENST00000599538 PTGDSP41222 190 aa13.07□□□□□ -0.32
VRK3-217ENST00000599538 GBX2P52951 348 aaPredicted RBP13.07□□□□□ -0.32
VRK3-217ENST00000599538 ACKR1Q16570 336 aa13.07□□□□□ -0.32
VRK3-217ENST00000599538 SLC25A35Q3KQZ1 300 aa13.07□□□□□ -0.32
VRK3-217ENST00000599538 MAMDC2Q7Z304 686 aaPredicted RBP13.07□□□□□ -0.32
VRK3-217ENST00000599538 CELF2-AS1Q8N7Q2 184 aa13.07□□□□□ -0.32
VRK3-217ENST00000599538 DTX3Q8N9I9 347 aa13.07□□□□□ -0.32
VRK3-217ENST00000599538 ZNF417Q8TAU3 575 aa13.07□□□□□ -0.32
VRK3-217ENST00000599538 PPP1R14BQ96C90 147 aa13.07□□□□□ -0.32
VRK3-217ENST00000599538 NEDD4LQ96PU5 975 aa13.07□□□□□ -0.32
VRK3-217ENST00000599538 ZNF587Q96SQ5 575 aaPredicted RBP13.07□□□□□ -0.32
VRK3-217ENST00000599538 TMCC2O75069 709 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 PAHP00439 452 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 OR8G3PP0DMU2 310 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 SLC2A2P11168 524 aaPredicted RBP13.06□□□□□ -0.32
VRK3-217ENST00000599538 TCEA1P23193 301 aaKnown RBP13.06□□□□□ -0.32
VRK3-217ENST00000599538 EDNRAP25101 427 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 THBS2P35442 1172 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 PPP3R1P63098 170 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 C17orf67Q0P5P2 114 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 IL11RAQ14626 422 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 SGCBQ16585 318 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 EMC4Q5J8M3 183 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 WDFY1Q8IWB7 410 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 OR14A2Q96R54 314 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 SOSTQ9BQB4 213 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 CPNE5Q9HCH3 593 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 B3GAT2Q9NPZ5 323 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 A0A1B0GTH9 108 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 ANKUB1A6NFN9 424 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 MASP2O00187 686 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 EFNA2O43921 213 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 ZFAND5O76080 213 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 DXOO77932 396 aaKnown RBP13.06□□□□□ -0.32
VRK3-217ENST00000599538 UMODP07911 640 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 HOXD12P35452 270 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 RFX2P48378 723 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 EVX1P49640 407 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 FOXK1P85037 733 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 MELKQ14680 651 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 ETFDHQ16134 617 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 XKRXQ6PP77 449 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 SLC16A9Q7RTY1 509 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 NRARPQ7Z6K4 114 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 AGBL5Q8NDL9 886 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 RNF138Q8WVD3 245 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 PPP1R3EQ9H7J1 279 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 INIPQ9NRY2 104 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 KLRF1Q9NZS2 232 aa13.06□□□□□ -0.32
VRK3-217ENST00000599538 MRM2Q9UI43 246 aaKnown RBP13.06□□□□□ -0.32
VRK3-217ENST00000599538 SDK2Q58EX2 2172 aa13.05□□□□□ -0.32
VRK3-217ENST00000599538 A0A1B0GVC2 190 aa13.05□□□□□ -0.32
VRK3-217ENST00000599538 A6NIN4 97 aa13.05□□□□□ -0.32
VRK3-217ENST00000599538 FTCDNL1E5RQL4 147 aa13.05□□□□□ -0.32
VRK3-217ENST00000599538 PLPP3O14495 311 aa13.05□□□□□ -0.32
VRK3-217ENST00000599538 RPP14O95059 124 aaKnown RBP13.05□□□□□ -0.32
VRK3-217ENST00000599538 MT-ATP6P00846 226 aa13.05□□□□□ -0.32
VRK3-217ENST00000599538 FOXF1Q12946 379 aa13.05□□□□□ -0.32
VRK3-217ENST00000599538 PCOLCEQ15113 449 aa13.05□□□□□ -0.32
VRK3-217ENST00000599538 BTBD16Q32M84 506 aa13.05□□□□□ -0.32
VRK3-217ENST00000599538 PYDC2Q56P42 97 aa13.05□□□□□ -0.32
VRK3-217ENST00000599538 EEF1A1P5Q5VTE0 462 aa13.05□□□□□ -0.32
VRK3-217ENST00000599538 HBMQ6B0K9 141 aa13.05□□□□□ -0.32
VRK3-217ENST00000599538 GPR139Q6DWJ6 353 aa13.05□□□□□ -0.32
VRK3-217ENST00000599538 FAM198BQ6UWH4 519 aa13.05□□□□□ -0.32
VRK3-217ENST00000599538 DPY19L4Q7Z388 723 aa13.05□□□□□ -0.32
VRK3-217ENST00000599538 DTWD2Q8NBA8 298 aa13.05□□□□□ -0.32
VRK3-217ENST00000599538 OR5L2Q8NGL0 311 aa13.05□□□□□ -0.32
VRK3-217ENST00000599538 OR6N2Q8NGY6 317 aa13.05□□□□□ -0.32
VRK3-217ENST00000599538 ZNF519Q8TB69 540 aa13.05□□□□□ -0.32
VRK3-217ENST00000599538 MR1Q95460 341 aa13.05□□□□□ -0.32
VRK3-217ENST00000599538 AMELYQ99218 206 aa13.05□□□□□ -0.32
VRK3-217ENST00000599538 ULBP3Q9BZM4 244 aa13.05□□□□□ -0.32
VRK3-217ENST00000599538 TSPAN10Q9H1Z9 355 aaPredicted RBP13.05□□□□□ -0.32
VRK3-217ENST00000599538 MOKQ9UQ07 419 aa13.05□□□□□ -0.32
VRK3-217ENST00000599538 RASD1Q9Y272 281 aa13.05□□□□□ -0.32
VRK3-217ENST00000599538 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.04□□□□□ -0.32
VRK3-217ENST00000599538 A0A0B4J203 849 aa13.04□□□□□ -0.32
VRK3-217ENST00000599538 KLF7O75840 302 aaPredicted RBP13.04□□□□□ -0.32
VRK3-217ENST00000599538 AHSA1O95433 338 aa13.04□□□□□ -0.32
VRK3-217ENST00000599538 ELK1P19419 428 aa13.04□□□□□ -0.32
VRK3-217ENST00000599538 DEFA1P59665 94 aa13.04□□□□□ -0.32
VRK3-217ENST00000599538 DEFA3P59666 94 aa13.04□□□□□ -0.32
VRK3-217ENST00000599538 INSM1Q01101 510 aaPredicted RBP13.04□□□□□ -0.32
VRK3-217ENST00000599538 C19orf57Q0VDD7 668 aa13.04□□□□□ -0.32
VRK3-217ENST00000599538 TRAM1Q15629 374 aa13.04□□□□□ -0.32
VRK3-217ENST00000599538 SFXN4Q6P4A7 337 aa13.04□□□□□ -0.32
VRK3-217ENST00000599538 RPL22L1Q6P5R6 122 aaKnown RBP13.04□□□□□ -0.32
VRK3-217ENST00000599538 CDC20BQ86Y33 519 aa13.04□□□□□ -0.32
VRK3-217ENST00000599538 MISPQ8IVT2 679 aa13.04□□□□□ -0.32
VRK3-217ENST00000599538 MS4A15Q8N5U1 240 aa13.04□□□□□ -0.32
VRK3-217ENST00000599538 GALNT6Q8NCL4 622 aa13.04□□□□□ -0.32
VRK3-217ENST00000599538 OR2T4Q8NH00 348 aa13.04□□□□□ -0.32
VRK3-217ENST00000599538 OR8K3Q8NH51 312 aa13.04□□□□□ -0.32
VRK3-217ENST00000599538 RGP1Q92546 391 aaPredicted RBP13.04□□□□□ -0.32
VRK3-217ENST00000599538 ADAD1Q96M93 576 aaKnown RBP13.04□□□□□ -0.32
VRK3-217ENST00000599538 RASL10BQ96S79 203 aa13.04□□□□□ -0.32
VRK3-217ENST00000599538 SACM1LQ9NTJ5 587 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms