RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 HLA-HP01893 362 aa13.74□□□□□ -0.21
LINC02560-201ENST00000596379 BMP2P12643 396 aa13.74□□□□□ -0.21
LINC02560-201ENST00000596379 HLA-DOBP13765 273 aa13.74□□□□□ -0.21
LINC02560-201ENST00000596379 ETS2P15036 469 aa13.74□□□□□ -0.21
LINC02560-201ENST00000596379 IFNGR1P15260 489 aa13.74□□□□□ -0.21
LINC02560-201ENST00000596379 NR4A1P22736 598 aa13.74□□□□□ -0.21
LINC02560-201ENST00000596379 FADDQ13158 208 aa13.74□□□□□ -0.21
LINC02560-201ENST00000596379 RIN1Q13671 783 aa13.74□□□□□ -0.21
LINC02560-201ENST00000596379 ALG10BQ5I7T1 473 aa13.74□□□□□ -0.21
LINC02560-201ENST00000596379 C5orf46Q6UWT4 87 aa13.74□□□□□ -0.21
LINC02560-201ENST00000596379 CROCCP2Q86T23 111 aa13.74□□□□□ -0.21
LINC02560-201ENST00000596379 COMTD1Q86VU5 262 aa13.74□□□□□ -0.21
LINC02560-201ENST00000596379 UEVLDQ8IX04 471 aa13.74□□□□□ -0.21
LINC02560-201ENST00000596379 C20orf196Q8IYI0 205 aa13.74□□□□□ -0.21
LINC02560-201ENST00000596379 MIER2Q8N344 545 aa13.74□□□□□ -0.21
LINC02560-201ENST00000596379 RFLNBQ8N5W9 214 aa13.74□□□□□ -0.21
LINC02560-201ENST00000596379 EMC6Q9BV81 110 aa13.74□□□□□ -0.21
LINC02560-201ENST00000596379 TPK1Q9H3S4 243 aa13.74□□□□□ -0.21
LINC02560-201ENST00000596379 RAD21L1Q9H4I0 556 aa13.74□□□□□ -0.21
LINC02560-201ENST00000596379 B3GNT2Q9NY97 397 aa13.74□□□□□ -0.21
LINC02560-201ENST00000596379 TCF21O43680 179 aa13.73□□□□□ -0.21
LINC02560-201ENST00000596379 TPST1O60507 370 aa13.73□□□□□ -0.21
LINC02560-201ENST00000596379 CD79AP11912 226 aa13.73□□□□□ -0.21
LINC02560-201ENST00000596379 NQO1P15559 274 aaKnown RBP13.73□□□□□ -0.21
LINC02560-201ENST00000596379 PRKAR1BP31321 381 aa13.73□□□□□ -0.21
LINC02560-201ENST00000596379 SRP14P37108 136 aaKnown RBP13.73□□□□□ -0.21
LINC02560-201ENST00000596379 AQP5P55064 265 aa13.73□□□□□ -0.21
LINC02560-201ENST00000596379 CDH15P55291 814 aa13.73□□□□□ -0.21
LINC02560-201ENST00000596379 PIGFQ07326 219 aa13.73□□□□□ -0.21
LINC02560-201ENST00000596379 MSMPQ1L6U9 139 aa13.73□□□□□ -0.21
LINC02560-201ENST00000596379 ULK3Q6PHR2 472 aa13.73□□□□□ -0.21
LINC02560-201ENST00000596379 NFKBIDQ8NI38 313 aa13.73□□□□□ -0.21
LINC02560-201ENST00000596379 RNF217Q8TC41 542 aa13.73□□□□□ -0.21
LINC02560-201ENST00000596379 DNAJA4Q8WW22 397 aaPredicted RBP13.73□□□□□ -0.21
LINC02560-201ENST00000596379 MS4A3Q96HJ5 214 aa13.73□□□□□ -0.21
LINC02560-201ENST00000596379 TXNDC15Q96J42 360 aa13.73□□□□□ -0.21
LINC02560-201ENST00000596379 MRPL37Q9BZE1 423 aaKnown RBP13.73□□□□□ -0.21
LINC02560-201ENST00000596379 KLHL14Q9P2G3 628 aa13.73□□□□□ -0.21
LINC02560-201ENST00000596379 A0A087WUJ7 227 aa13.72□□□□□ -0.21
LINC02560-201ENST00000596379 ZNF35P13682 527 aa13.72□□□□□ -0.21
LINC02560-201ENST00000596379 HOXB9P17482 250 aaPredicted RBP13.72□□□□□ -0.21
LINC02560-201ENST00000596379 CCNIQ14094 377 aa13.72□□□□□ -0.21
LINC02560-201ENST00000596379 GSG1Q2KHT4 349 aa13.72□□□□□ -0.21
LINC02560-201ENST00000596379 GLIPR1L2Q4G1C9 344 aa13.72□□□□□ -0.21
LINC02560-201ENST00000596379 ZNF813Q6ZN06 617 aa13.72□□□□□ -0.21
LINC02560-201ENST00000596379 GOLGA6L1Q8N7Z2 621 aa13.72□□□□□ -0.21
LINC02560-201ENST00000596379 ADPRHL1Q8NDY3 354 aa13.72□□□□□ -0.21
LINC02560-201ENST00000596379 MRPL24Q96A35 216 aaKnown RBP13.72□□□□□ -0.21
LINC02560-201ENST00000596379 SLC47A1Q96FL8 570 aa13.72□□□□□ -0.21
LINC02560-201ENST00000596379 SLC41A3Q96GZ6 507 aa13.72□□□□□ -0.21
LINC02560-201ENST00000596379 LRR1Q96L50 414 aa13.72□□□□□ -0.21
LINC02560-201ENST00000596379 ZNF75AQ96N20 296 aa13.72□□□□□ -0.21
LINC02560-201ENST00000596379 MED29Q9NX70 200 aa13.72□□□□□ -0.21
LINC02560-201ENST00000596379 SLC25A37Q9NYZ2 338 aa13.72□□□□□ -0.21
LINC02560-201ENST00000596379 SLAMF8Q9P0V8 285 aa13.72□□□□□ -0.21
LINC02560-201ENST00000596379 REV1Q9UBZ9 1251 aa13.72□□□□□ -0.21
LINC02560-201ENST00000596379 POFUT2Q9Y2G5 429 aa13.72□□□□□ -0.21
LINC02560-201ENST00000596379 ANK2Q01484 3957 aa13.71□□□□□ -0.21
LINC02560-201ENST00000596379 SYNGR3O43761 229 aa13.71□□□□□ -0.21
LINC02560-201ENST00000596379 BGLAPP02818 100 aa13.71□□□□□ -0.21
LINC02560-201ENST00000596379 ARAFP10398 606 aa13.71□□□□□ -0.21
LINC02560-201ENST00000596379 ITGA2P17301 1181 aa13.71□□□□□ -0.21
LINC02560-201ENST00000596379 TCN1P20061 433 aaPredicted RBP13.71□□□□□ -0.21
LINC02560-201ENST00000596379 EVX1P49640 407 aa13.71□□□□□ -0.21
LINC02560-201ENST00000596379 POU3F1Q03052 451 aaPredicted RBP13.71□□□□□ -0.21
LINC02560-201ENST00000596379 CAMK2DQ13557 499 aa13.71□□□□□ -0.21
LINC02560-201ENST00000596379 MFSD13AQ14CX5 517 aa13.71□□□□□ -0.21
LINC02560-201ENST00000596379 GCNT6Q5T4J0 391 aa13.71□□□□□ -0.21
LINC02560-201ENST00000596379 FAM91A1Q658Y4 838 aa13.71□□□□□ -0.21
LINC02560-201ENST00000596379 DHRS4L2Q6PKH6 230 aa13.71□□□□□ -0.21
LINC02560-201ENST00000596379 UGT2A3Q6UWM9 527 aa13.71□□□□□ -0.21
LINC02560-201ENST00000596379 NHLRC1Q6VVB1 395 aa13.71□□□□□ -0.21
LINC02560-201ENST00000596379 WDFY1Q8IWB7 410 aa13.71□□□□□ -0.21
LINC02560-201ENST00000596379 MSRB3Q8IXL7 192 aa13.71□□□□□ -0.21
LINC02560-201ENST00000596379 C10orf111Q8N326 155 aa13.71□□□□□ -0.21
LINC02560-201ENST00000596379 OR6S1Q8NH40 331 aa13.71□□□□□ -0.21
LINC02560-201ENST00000596379 MS4A5Q9H3V2 200 aa13.71□□□□□ -0.21
LINC02560-201ENST00000596379 TMEM27Q9HBJ8 222 aa13.71□□□□□ -0.21
LINC02560-201ENST00000596379 B3GAT2Q9NPZ5 323 aa13.71□□□□□ -0.21
LINC02560-201ENST00000596379 RAB21Q9UL25 225 aa13.71□□□□□ -0.21
LINC02560-201ENST00000596379 SPEF1Q9Y4P9 236 aa13.71□□□□□ -0.21
LINC02560-201ENST00000596379 CORINQ9Y5Q5 1042 aa13.71□□□□□ -0.21
LINC02560-201ENST00000596379 ZNF726A6NNF4 738 aa13.7□□□□□ -0.22
LINC02560-201ENST00000596379 M0R233 179 aa13.7□□□□□ -0.22
LINC02560-201ENST00000596379 HPXP02790 462 aa13.7□□□□□ -0.22
LINC02560-201ENST00000596379 B4GALT1P15291 398 aa13.7□□□□□ -0.22
LINC02560-201ENST00000596379 ZNF14P17017 642 aaPredicted RBP13.7□□□□□ -0.22
LINC02560-201ENST00000596379 COL8A2P25067 703 aa13.7□□□□□ -0.22
LINC02560-201ENST00000596379 GLRXP35754 106 aa13.7□□□□□ -0.22
LINC02560-201ENST00000596379 PTDSS1P48651 473 aaKnown RBP13.7□□□□□ -0.22
LINC02560-201ENST00000596379 SEC24CP53992 1094 aa13.7□□□□□ -0.22
LINC02560-201ENST00000596379 SLC18A1P54219 525 aa13.7□□□□□ -0.22
LINC02560-201ENST00000596379 DVL1P1P54792 670 aaPredicted RBP13.7□□□□□ -0.22
LINC02560-201ENST00000596379 CDK6Q00534 326 aa13.7□□□□□ -0.22
LINC02560-201ENST00000596379 PMS2P3Q13401 168 aa13.7□□□□□ -0.22
LINC02560-201ENST00000596379 OR1Q1Q15612 314 aa13.7□□□□□ -0.22
LINC02560-201ENST00000596379 TRMT5Q32P41 509 aaKnown RBP13.7□□□□□ -0.22
LINC02560-201ENST00000596379 ELFN2Q5R3F8 820 aa13.7□□□□□ -0.22
LINC02560-201ENST00000596379 REEP3Q6NUK4 255 aa13.7□□□□□ -0.22
LINC02560-201ENST00000596379 EPGNQ6UW88 154 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms