RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 HIF3AQ9Y2N7 669 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 A0A1B0GW55 424 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 IDSB3KWA1 339 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 FOXS1O43638 330 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 DUX4L2P0CJ85 424 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 DUX4L3P0CJ86 424 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 DUX4L4P0CJ87 422 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 DUX4L5P0CJ88 424 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 DUX4L6P0CJ89 424 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 DUX4L7P0CJ90 424 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 RPA2P15927 270 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 ATF4P18848 351 aaPredicted RBP12.07□□□□□ -0.48
VRK3-209ENST00000594948 ITPKBP27987 946 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 CSF2RBP32927 897 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 ADPRHP54922 357 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 RPS15P62841 145 aaKnown RBP12.07□□□□□ -0.48
VRK3-209ENST00000594948 ERVK-25P63136 954 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 EMC4Q5J8M3 183 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 STPG1Q5TH74 334 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 LEG1Q6P5S2 330 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 ANKRD16Q6P6B7 361 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 ARSKQ6UWY0 536 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 GSG1LQ6UXU4 331 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 FAM122BQ7Z309 247 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 JAZF1Q86VZ6 243 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 LSRQ86X29 649 aaPredicted RBP12.07□□□□□ -0.48
VRK3-209ENST00000594948 CDC20BQ86Y33 519 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 LRRC75AQ8NAA5 344 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 BVESQ8NE79 360 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 OR6K3Q8NGY3 331 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 ZPLD1Q8TCW7 415 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 ST8SIA4Q92187 359 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 RASD2Q96D21 266 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 TOE1Q96GM8 510 aaKnown RBP12.07□□□□□ -0.48
VRK3-209ENST00000594948 CXorf58Q96LI9 332 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 WDR92Q96MX6 357 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 VSTM2LQ96N03 204 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 ARPC5LQ9BPX5 153 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 TSPAN10Q9H1Z9 355 aaPredicted RBP12.07□□□□□ -0.48
VRK3-209ENST00000594948 TTYH1Q9H313 450 aaPredicted RBP12.07□□□□□ -0.48
VRK3-209ENST00000594948 LDAHQ9H6V9 325 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 FBRSQ9HAH7 460 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 DUX4Q9UBX2 424 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 YBX2Q9Y2T7 364 aaKnown RBP12.07□□□□□ -0.48
VRK3-209ENST00000594948 BLACEA4D250 179 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 TMEM212A6NML5 194 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 C2orf74A8MZ97 194 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 PHYHO14832 338 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 OR10H2O60403 315 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 APBB3O95704 486 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 CD14P08571 375 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 AKAIN1P0CW23 69 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 EGR3Q06889 387 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 TUSC1Q2TAM9 212 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 LIPNQ5VXI9 398 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 NHLRC1Q6VVB1 395 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 NUP54Q7Z3B4 507 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 CDH26Q8IXH8 852 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 OR5T3Q8NGG3 340 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 OR4C16Q8NGL9 310 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 OR5M9Q8NGP3 310 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 FAM3CQ92520 227 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 EDAQ92838 391 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 C3orf49Q96BT1 292 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 ARSGQ96EG1 525 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 ADAD1Q96M93 576 aaKnown RBP12.07□□□□□ -0.48
VRK3-209ENST00000594948 GINS4Q9BRT9 223 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 COMMD4Q9H0A8 199 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 COQ3Q9NZJ6 369 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 FRRS1LQ9P0K9 344 aa12.07□□□□□ -0.48
VRK3-209ENST00000594948 ATG2AQ2TAZ0 1938 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 HEATR5AQ86XA9 2040 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 A0A0J9YY10 115 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 GGT3PA6NGU5 568 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 SERINC4A6NH21 518 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 ANXA2P2A6NMY6 339 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 OR4C45A6NMZ5 311 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 TNFRSF10CO14798 259 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 SCAMP1O15126 338 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 ARPC5O15511 151 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 LPLP06858 475 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 ANXA2P07355 339 aaKnown RBP12.06□□□□□ -0.48
VRK3-209ENST00000594948 OR8G3PP0DMU2 310 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 PNMTP11086 282 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 POU3F2P20265 443 aaPredicted RBP12.06□□□□□ -0.48
VRK3-209ENST00000594948 CD96P40200 585 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 CDKN2AP42771 156 aaKnown RBP12.06□□□□□ -0.48
VRK3-209ENST00000594948 GRK6P43250 576 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 FAM53BQ14153 422 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 ZNF273Q14593 569 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 TCEA2Q15560 299 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 PCGF3Q3KNV8 242 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 FAAP20Q6NZ36 180 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 FDX2Q6P4F2 183 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 ENPP7Q6UWV6 458 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 DGAT2L6Q6ZPD8 337 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 TMPRSS12Q86WS5 348 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 PDZD9Q8IXQ8 264 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 TMEFF1Q8IYR6 380 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 CSNK1A1LQ8N752 337 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms