RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 SOX2P48431 317 aa15.04■□□□□ -0
LIG1-206ENST00000594067 RPS15P62841 145 aaKnown RBP15.04■□□□□ -0
LIG1-206ENST00000594067 CT45A2Q5DJT8 189 aa15.04■□□□□ -0
LIG1-206ENST00000594067 BCORP1Q8N888 145 aa15.04■□□□□ -0
LIG1-206ENST00000594067 AVL9Q8NBF6 648 aa15.04■□□□□ -0
LIG1-206ENST00000594067 ZBTB44Q8NCP5 570 aa15.04■□□□□ -0
LIG1-206ENST00000594067 SYNPRQ8TBG9 265 aa15.04■□□□□ -0
LIG1-206ENST00000594067 RNF166Q96A37 237 aaPredicted RBP15.04■□□□□ -0
LIG1-206ENST00000594067 MRPL48Q96GC5 212 aaKnown RBP15.04■□□□□ -0
LIG1-206ENST00000594067 SHARPINQ9H0F6 387 aa15.04■□□□□ -0
LIG1-206ENST00000594067 FBRSQ9HAH7 460 aa15.04■□□□□ -0
LIG1-206ENST00000594067 AKAP7Q9P0M2 348 aaPredicted RBP15.04■□□□□ -0
LIG1-206ENST00000594067 KLHL9Q9P2J3 617 aa15.04■□□□□ -0
LIG1-206ENST00000594067 ERVK-19Q9WJR5 959 aa15.04■□□□□ -0
LIG1-206ENST00000594067 YBX2Q9Y2T7 364 aaKnown RBP15.04■□□□□ -0
LIG1-206ENST00000594067 TMEM72A0PK05 275 aa15.04■□□□□ -0
LIG1-206ENST00000594067 EFCAB7A8K855 629 aa15.04■□□□□ -0
LIG1-206ENST00000594067 MCRIP1C9JLW8 97 aa15.04■□□□□ -0
LIG1-206ENST00000594067 TSPAN9O75954 239 aa15.04■□□□□ -0
LIG1-206ENST00000594067 OR2A4O95047 310 aa15.04■□□□□ -0
LIG1-206ENST00000594067 GIPP09681 153 aaPredicted RBP15.04■□□□□ -0
LIG1-206ENST00000594067 HTR4Q13639 388 aa15.04■□□□□ -0
LIG1-206ENST00000594067 FAM122CQ6P4D5 195 aa15.04■□□□□ -0
LIG1-206ENST00000594067 FBXO46Q6PJ61 603 aaPredicted RBP15.04■□□□□ -0
LIG1-206ENST00000594067 OOSP2Q86WS3 158 aa15.04■□□□□ -0
LIG1-206ENST00000594067 SLC35F3Q8IY50 421 aa15.04■□□□□ -0
LIG1-206ENST00000594067 ESX1Q8N693 406 aa15.04■□□□□ -0
LIG1-206ENST00000594067 ZNF784Q8NCA9 323 aaPredicted RBP15.04■□□□□ -0
LIG1-206ENST00000594067 OR2A7Q96R45 310 aa15.04■□□□□ -0
LIG1-206ENST00000594067 LMF1Q96S06 567 aa15.04■□□□□ -0
LIG1-206ENST00000594067 PBX4Q9BYU1 374 aa15.04■□□□□ -0
LIG1-206ENST00000594067 RXFP3Q9NSD7 469 aa15.04■□□□□ -0
LIG1-206ENST00000594067 RABL2AQ9UBK7 228 aaPredicted RBP15.04■□□□□ -0
LIG1-206ENST00000594067 OR5V1Q9UGF6 321 aa15.04■□□□□ -0
LIG1-206ENST00000594067 ING1Q9UK53 422 aaPredicted RBP15.04■□□□□ -0
LIG1-206ENST00000594067 FBXL3Q9UKT7 428 aa15.04■□□□□ -0
LIG1-206ENST00000594067 RABL2BQ9UNT1 228 aa15.04■□□□□ -0
LIG1-206ENST00000594067 KLHDC2Q9Y2U9 406 aa15.04■□□□□ -0
LIG1-206ENST00000594067 IGKV1D-42A0A075B6H8 117 aa15.03■□□□□ -0
LIG1-206ENST00000594067 OR2M5A3KFT3 312 aa15.03■□□□□ -0
LIG1-206ENST00000594067 TNFP01375 233 aa15.03■□□□□ -0
LIG1-206ENST00000594067 NMBP08949 121 aa15.03■□□□□ -0
LIG1-206ENST00000594067 PBX2P40425 430 aa15.03■□□□□ -0
LIG1-206ENST00000594067 TPMTP51580 245 aa15.03■□□□□ -0
LIG1-206ENST00000594067 C1orf61Q13536 156 aa15.03■□□□□ -0
LIG1-206ENST00000594067 SFRP5Q5T4F7 317 aa15.03■□□□□ -0
LIG1-206ENST00000594067 ARSKQ6UWY0 536 aa15.03■□□□□ -0
LIG1-206ENST00000594067 SLC22A18ASQ8N1D0 253 aa15.03■□□□□ -0
LIG1-206ENST00000594067 OR6M1Q8NGM8 313 aa15.03■□□□□ -0
LIG1-206ENST00000594067 C16orf52Q8NHV5 167 aa15.03■□□□□ -0
LIG1-206ENST00000594067 C1orf216Q8TAB5 229 aa15.03■□□□□ -0
LIG1-206ENST00000594067 PHYHIPQ92561 330 aa15.03■□□□□ -0
LIG1-206ENST00000594067 CXorf58Q96LI9 332 aa15.03■□□□□ -0
LIG1-206ENST00000594067 ZNF578Q96N58 590 aaPredicted RBP15.03■□□□□ -0
LIG1-206ENST00000594067 G6PC3Q9BUM1 346 aa15.03■□□□□ -0
LIG1-206ENST00000594067 FOXJ3Q9UPW0 622 aa15.03■□□□□ -0
LIG1-206ENST00000594067 PCDHGA5Q9Y5G8 931 aa15.03■□□□□ -0
LIG1-206ENST00000594067 ATG2AQ2TAZ0 1938 aa15.03■□□□□ -0
LIG1-206ENST00000594067 H3BSH0 61 aa15.03■□□□□ -0
LIG1-206ENST00000594067 AKT2P31751 481 aa15.03■□□□□ -0
LIG1-206ENST00000594067 NUP62P37198 522 aaPredicted RBP15.03■□□□□ -0
LIG1-206ENST00000594067 PTH2RP49190 550 aa15.03■□□□□ -0
LIG1-206ENST00000594067 AP3S2P59780 193 aa15.03■□□□□ -0
LIG1-206ENST00000594067 PSMA6P60900 246 aaKnown RBP15.03■□□□□ -0
LIG1-206ENST00000594067 LINC00303Q3SY05 128 aa15.03■□□□□ -0
LIG1-206ENST00000594067 TMEM69Q5SWH9 247 aa15.03■□□□□ -0
LIG1-206ENST00000594067 C9orf50Q5SZB4 431 aa15.03■□□□□ -0
LIG1-206ENST00000594067 OR5M10Q6IEU7 315 aa15.03■□□□□ -0
LIG1-206ENST00000594067 PWWP2BQ6NUJ5 590 aa15.03■□□□□ -0
LIG1-206ENST00000594067 TAF8Q7Z7C8 310 aa15.03■□□□□ -0
LIG1-206ENST00000594067 JAZF1Q86VZ6 243 aa15.03■□□□□ -0
LIG1-206ENST00000594067 MEIOBQ8N635 442 aa15.03■□□□□ -0
LIG1-206ENST00000594067 THEM6Q8WUY1 208 aa15.03■□□□□ -0
LIG1-206ENST00000594067 FCAMRQ8WWV6 532 aa15.03■□□□□ -0
LIG1-206ENST00000594067 DGAT2Q96PD7 388 aa15.03■□□□□ -0
LIG1-206ENST00000594067 MED9Q9NWA0 146 aa15.03■□□□□ -0
LIG1-206ENST00000594067 TAS2R5Q9NYW4 299 aa15.03■□□□□ -0
LIG1-206ENST00000594067 ZNF69Q9UC07 566 aa15.03■□□□□ -0
LIG1-206ENST00000594067 A0A1B0GTH9 108 aa15.02■□□□□ -0
LIG1-206ENST00000594067 ANKRD20A5PA0PJZ0 165 aa15.02■□□□□ -0
LIG1-206ENST00000594067 OR6C65A6NJZ3 312 aa15.02■□□□□ -0
LIG1-206ENST00000594067 ANXA7P20073 488 aaKnown RBP15.02■□□□□ -0
LIG1-206ENST00000594067 MAOAP21397 527 aa15.02■□□□□ -0
LIG1-206ENST00000594067 CTHP32929 405 aa15.02■□□□□ -0
LIG1-206ENST00000594067 CCR4P51679 360 aa15.02■□□□□ -0
LIG1-206ENST00000594067 RPS4XP62701 263 aaKnown RBP15.02■□□□□ -0
LIG1-206ENST00000594067 ZNF684Q5T5D7 378 aa15.02■□□□□ -0
LIG1-206ENST00000594067 TMEM92Q6UXU6 159 aa15.02■□□□□ -0
LIG1-206ENST00000594067 METTL27Q8N6F8 245 aaPredicted RBP15.02■□□□□ -0
LIG1-206ENST00000594067 DNAAF1Q8NEP3 725 aa15.02■□□□□ -0
LIG1-206ENST00000594067 RPS4Y2Q8TD47 263 aa15.02■□□□□ -0
LIG1-206ENST00000594067 GPBAR1Q8TDU6 330 aa15.02■□□□□ -0
LIG1-206ENST00000594067 ST8SIA4Q92187 359 aa15.02■□□□□ -0
LIG1-206ENST00000594067 S100A16Q96FQ6 103 aaKnown RBP15.02■□□□□ -0
LIG1-206ENST00000594067 ADAD1Q96M93 576 aaKnown RBP15.02■□□□□ -0
LIG1-206ENST00000594067 TMPRSS13Q9BYE2 586 aa15.02■□□□□ -0
LIG1-206ENST00000594067 SRA1Q9HD15 236 aaKnown RBP15.02■□□□□ -0
LIG1-206ENST00000594067 PRTFDC1Q9NRG1 225 aa15.02■□□□□ -0
LIG1-206ENST00000594067 ELOA3DA6NLF2 546 aaPredicted RBP15.02□□□□□ -0.01
LIG1-206ENST00000594067 H7C1C5 153 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms