RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 TPST1O60507 370 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 SLC43A1O75387 559 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 UPK3AO75631 287 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 STAMBPO95630 424 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 IGLV1-44P01699 117 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 ZNF43P17038 809 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 NPR2P20594 1047 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 CAPZA2P47755 286 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 GZMMP51124 257 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 CLDN17P56750 224 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 EGR4Q05215 589 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 NPRL3Q12980 569 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 SCARB2Q14108 478 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 GLIPR1L2Q4G1C9 344 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 SPATA21Q7Z572 469 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 MYPOPQ86VE0 399 aaPredicted RBP12.77□□□□□ -0.37
PNKP-202ENST00000593706 EPHX4Q8IUS5 362 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 GPR137CQ8N3F9 429 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 RFLNBQ8N5W9 214 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 LSMEM1Q8N8F7 131 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 NUP37Q8NFH4 326 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 SNX18Q96RF0 628 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 WFDC6Q9BQY6 131 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 PTDSS2Q9BVG9 487 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 LINC00470Q9BZP3 86 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 NELFAQ9H3P2 528 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 ZNF442Q9H7R0 627 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 KAT8Q9H7Z6 458 aaKnown RBP12.77□□□□□ -0.37
PNKP-202ENST00000593706 EVPLLA8MZ36 301 aa12.76□□□□□ -0.37
PNKP-202ENST00000593706 ANGPT2O15123 496 aa12.76□□□□□ -0.37
PNKP-202ENST00000593706 IGKV3-15P01624 115 aa12.76□□□□□ -0.37
PNKP-202ENST00000593706 CELA3BP08861 270 aa12.76□□□□□ -0.37
PNKP-202ENST00000593706 PNMTP11086 282 aa12.76□□□□□ -0.37
PNKP-202ENST00000593706 GIFP27352 417 aa12.76□□□□□ -0.37
PNKP-202ENST00000593706 THBS4P35443 961 aa12.76□□□□□ -0.37
PNKP-202ENST00000593706 RPS5P46782 204 aaKnown RBP12.76□□□□□ -0.37
PNKP-202ENST00000593706 MTPNP58546 118 aa12.76□□□□□ -0.37
PNKP-202ENST00000593706 ARF1P84077 181 aaKnown RBP12.76□□□□□ -0.37
PNKP-202ENST00000593706 IL1RL1Q01638 556 aa12.76□□□□□ -0.37
PNKP-202ENST00000593706 GUCY1A3Q02108 690 aa12.76□□□□□ -0.37
PNKP-202ENST00000593706 RINLQ6ZS11 566 aa12.76□□□□□ -0.37
PNKP-202ENST00000593706 ZCCHC24Q8N2G6 241 aaKnown RBP12.76□□□□□ -0.37
PNKP-202ENST00000593706 KDM8Q8N371 416 aa12.76□□□□□ -0.37
PNKP-202ENST00000593706 HIPK4Q8NE63 616 aa12.76□□□□□ -0.37
PNKP-202ENST00000593706 MFSD8Q8NHS3 518 aa12.76□□□□□ -0.37
PNKP-202ENST00000593706 STK35Q8TDR2 534 aa12.76□□□□□ -0.37
PNKP-202ENST00000593706 NEU4Q8WWR8 484 aaPredicted RBP12.76□□□□□ -0.37
PNKP-202ENST00000593706 SAR1AQ9NR31 198 aa12.76□□□□□ -0.37
PNKP-202ENST00000593706 TMEFF2Q9UIK5 374 aaPredicted RBP12.76□□□□□ -0.37
PNKP-202ENST00000593706 RCE1Q9Y256 329 aa12.76□□□□□ -0.37
PNKP-202ENST00000593706 IGKV1D-42A0A075B6H8 117 aa12.75□□□□□ -0.37
PNKP-202ENST00000593706 A0A1B0GWA3 101 aa12.75□□□□□ -0.37
PNKP-202ENST00000593706 TPST2O60704 377 aa12.75□□□□□ -0.37
PNKP-202ENST00000593706 MFN2O95140 757 aa12.75□□□□□ -0.37
PNKP-202ENST00000593706 TACSTD2P09758 323 aa12.75□□□□□ -0.37
PNKP-202ENST00000593706 TROVE2P10155 538 aaKnown RBP eCLIP12.75□□□□□ -0.37
PNKP-202ENST00000593706 HOXB1P14653 301 aaPredicted RBP12.75□□□□□ -0.37
PNKP-202ENST00000593706 IFNGR1P15260 489 aa12.75□□□□□ -0.37
PNKP-202ENST00000593706 SLC6A2P23975 617 aa12.75□□□□□ -0.37
PNKP-202ENST00000593706 AQP1P29972 269 aa12.75□□□□□ -0.37
PNKP-202ENST00000593706 IL2RGP31785 369 aa12.75□□□□□ -0.37
PNKP-202ENST00000593706 CRYBA2P53672 197 aa12.75□□□□□ -0.37
PNKP-202ENST00000593706 HGFACQ04756 655 aa12.75□□□□□ -0.37
PNKP-202ENST00000593706 RBBP4Q09028 425 aa12.75□□□□□ -0.37
PNKP-202ENST00000593706 SNTB2Q13425 540 aaKnown RBP12.75□□□□□ -0.37
PNKP-202ENST00000593706 C1DQ13901 141 aaKnown RBP12.75□□□□□ -0.37
PNKP-202ENST00000593706 CCNIQ14094 377 aa12.75□□□□□ -0.37
PNKP-202ENST00000593706 COQ5Q5HYK3 327 aa12.75□□□□□ -0.37
PNKP-202ENST00000593706 KRT73Q86Y46 540 aa12.75□□□□□ -0.37
PNKP-202ENST00000593706 FAM169BQ8N8A8 192 aa12.75□□□□□ -0.37
PNKP-202ENST00000593706 LINC01356Q8N9X3 169 aa12.75□□□□□ -0.37
PNKP-202ENST00000593706 HPS1Q92902 700 aa12.75□□□□□ -0.37
PNKP-202ENST00000593706 C12orf10Q9HB07 376 aa12.75□□□□□ -0.37
PNKP-202ENST00000593706 MED4Q9NPJ6 270 aa12.75□□□□□ -0.37
PNKP-202ENST00000593706 RPS6KB2Q9UBS0 482 aa12.75□□□□□ -0.37
PNKP-202ENST00000593706 IGHV2OR16-5A0A0B4J2B6 119 aa12.74□□□□□ -0.37
PNKP-202ENST00000593706 PRORSD1PA6NEY8 169 aa12.74□□□□□ -0.37
PNKP-202ENST00000593706 AKAP8O43823 692 aaKnown RBP12.74□□□□□ -0.37
PNKP-202ENST00000593706 SEC14L2O76054 403 aa12.74□□□□□ -0.37
PNKP-202ENST00000593706 CBR1P16152 277 aa12.74□□□□□ -0.37
PNKP-202ENST00000593706 ITGA2P17301 1181 aa12.74□□□□□ -0.37
PNKP-202ENST00000593706 PCGF2P35227 344 aa12.74□□□□□ -0.37
PNKP-202ENST00000593706 ARR3P36575 388 aa12.74□□□□□ -0.37
PNKP-202ENST00000593706 KLF10Q13118 480 aa12.74□□□□□ -0.37
PNKP-202ENST00000593706 NFYCQ13952 458 aa12.74□□□□□ -0.37
PNKP-202ENST00000593706 DAG1Q14118 895 aa12.74□□□□□ -0.37
PNKP-202ENST00000593706 CEACAM16Q2WEN9 425 aa12.74□□□□□ -0.37
PNKP-202ENST00000593706 TRMT5Q32P41 509 aaKnown RBP12.74□□□□□ -0.37
PNKP-202ENST00000593706 KRT80Q6KB66 452 aa12.74□□□□□ -0.37
PNKP-202ENST00000593706 CDK20Q8IZL9 346 aa12.74□□□□□ -0.37
PNKP-202ENST00000593706 C11orf65Q8NCR3 313 aa12.74□□□□□ -0.37
PNKP-202ENST00000593706 PIK3C3Q8NEB9 887 aa12.74□□□□□ -0.37
PNKP-202ENST00000593706 ANKK1Q8NFD2 765 aa12.74□□□□□ -0.37
PNKP-202ENST00000593706 GPR32P1Q8NGA4 272 aa12.74□□□□□ -0.37
PNKP-202ENST00000593706 UBASH3BQ8TF42 649 aa12.74□□□□□ -0.37
PNKP-202ENST00000593706 C1orf159Q96HA4 380 aa12.74□□□□□ -0.37
PNKP-202ENST00000593706 SPATA5L1Q9BVQ7 753 aa12.74□□□□□ -0.37
PNKP-202ENST00000593706 TPK1Q9H3S4 243 aa12.74□□□□□ -0.37
PNKP-202ENST00000593706 CRLF2Q9HC73 371 aa12.74□□□□□ -0.37
PNKP-202ENST00000593706 GPR35Q9HC97 309 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms