RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 TMEM123Q8N131 208 aa19.58■□□□□ 0.72
SSBP4-203ENST00000593641 LINC01356Q8N9X3 169 aa19.58■□□□□ 0.72
SSBP4-203ENST00000593641 ADPRHL1Q8NDY3 354 aa19.58■□□□□ 0.72
SSBP4-203ENST00000593641 RNF217Q8TC41 542 aa19.58■□□□□ 0.72
SSBP4-203ENST00000593641 SPATA5L1Q9BVQ7 753 aa19.58■□□□□ 0.72
SSBP4-203ENST00000593641 B3GAT2Q9NPZ5 323 aa19.58■□□□□ 0.72
SSBP4-203ENST00000593641 CORINQ9Y5Q5 1042 aa19.58■□□□□ 0.72
SSBP4-203ENST00000593641 TMEM129A0AVI4 362 aa19.57■□□□□ 0.72
SSBP4-203ENST00000593641 LILRA1O75019 489 aa19.57■□□□□ 0.72
SSBP4-203ENST00000593641 C8BP07358 591 aa19.57■□□□□ 0.72
SSBP4-203ENST00000593641 ADRA2AP08913 450 aa19.57■□□□□ 0.72
SSBP4-203ENST00000593641 HTR2AP28223 471 aa19.57■□□□□ 0.72
SSBP4-203ENST00000593641 SRP14P37108 136 aaKnown RBP19.57■□□□□ 0.72
SSBP4-203ENST00000593641 STX1BP61266 288 aa19.57■□□□□ 0.72
SSBP4-203ENST00000593641 GCNT6Q5T4J0 391 aa19.57■□□□□ 0.72
SSBP4-203ENST00000593641 CARD17Q5XLA6 110 aa19.57■□□□□ 0.72
SSBP4-203ENST00000593641 ULK3Q6PHR2 472 aa19.57■□□□□ 0.72
SSBP4-203ENST00000593641 KRT73Q86Y46 540 aa19.57■□□□□ 0.72
SSBP4-203ENST00000593641 RFLNBQ8N5W9 214 aa19.57■□□□□ 0.72
SSBP4-203ENST00000593641 EPYCQ99645 322 aa19.57■□□□□ 0.72
SSBP4-203ENST00000593641 KLHL14Q9P2G3 628 aa19.57■□□□□ 0.72
SSBP4-203ENST00000593641 TESQ9UGI8 421 aaKnown RBP19.57■□□□□ 0.72
SSBP4-203ENST00000593641 RAB21Q9UL25 225 aa19.57■□□□□ 0.72
SSBP4-203ENST00000593641 SPEF1Q9Y4P9 236 aa19.57■□□□□ 0.72
SSBP4-203ENST00000593641 IGKV1D-42A0A075B6H8 117 aa19.56■□□□□ 0.72
SSBP4-203ENST00000593641 TCF21O43680 179 aa19.56■□□□□ 0.72
SSBP4-203ENST00000593641 HLA-HP01893 362 aa19.56■□□□□ 0.72
SSBP4-203ENST00000593641 CD79AP11912 226 aa19.56■□□□□ 0.72
SSBP4-203ENST00000593641 IL2RGP31785 369 aa19.56■□□□□ 0.72
SSBP4-203ENST00000593641 POU3F1Q03052 451 aaPredicted RBP19.56■□□□□ 0.72
SSBP4-203ENST00000593641 GSG1Q2KHT4 349 aa19.56■□□□□ 0.72
SSBP4-203ENST00000593641 FAM91A1Q658Y4 838 aa19.56■□□□□ 0.72
SSBP4-203ENST00000593641 SNX32Q86XE0 403 aa19.56■□□□□ 0.72
SSBP4-203ENST00000593641 C20orf196Q8IYI0 205 aa19.56■□□□□ 0.72
SSBP4-203ENST00000593641 NFKBIDQ8NI38 313 aa19.56■□□□□ 0.72
SSBP4-203ENST00000593641 SLC47A1Q96FL8 570 aa19.56■□□□□ 0.72
SSBP4-203ENST00000593641 ASPNQ9BXN1 380 aa19.56■□□□□ 0.72
SSBP4-203ENST00000593641 TPK1Q9H3S4 243 aa19.56■□□□□ 0.72
SSBP4-203ENST00000593641 TMEFF2Q9UIK5 374 aaPredicted RBP19.56■□□□□ 0.72
SSBP4-203ENST00000593641 ARAFP10398 606 aa19.55■□□□□ 0.72
SSBP4-203ENST00000593641 PCMT1P22061 227 aa19.55■□□□□ 0.72
SSBP4-203ENST00000593641 NR4A1P22736 598 aa19.55■□□□□ 0.72
SSBP4-203ENST00000593641 SLC18A1P54219 525 aa19.55■□□□□ 0.72
SSBP4-203ENST00000593641 CDK6Q00534 326 aa19.55■□□□□ 0.72
SSBP4-203ENST00000593641 RIN1Q13671 783 aa19.55■□□□□ 0.72
SSBP4-203ENST00000593641 PHYHD1Q5SRE7 291 aa19.55■□□□□ 0.72
SSBP4-203ENST00000593641 REEP3Q6NUK4 255 aa19.55■□□□□ 0.72
SSBP4-203ENST00000593641 DHRS4L2Q6PKH6 230 aa19.55■□□□□ 0.72
SSBP4-203ENST00000593641 ZNF813Q6ZN06 617 aa19.55■□□□□ 0.72
SSBP4-203ENST00000593641 SCAIQ8N9R8 606 aa19.55■□□□□ 0.72
SSBP4-203ENST00000593641 LRR1Q96L50 414 aa19.55■□□□□ 0.72
SSBP4-203ENST00000593641 EMC6Q9BV81 110 aa19.55■□□□□ 0.72
SSBP4-203ENST00000593641 TMEM27Q9HBJ8 222 aa19.55■□□□□ 0.72
SSBP4-203ENST00000593641 SLC13A4Q9UKG4 626 aa19.55■□□□□ 0.72
SSBP4-203ENST00000593641 POFUT2Q9Y2G5 429 aa19.55■□□□□ 0.72
SSBP4-203ENST00000593641 NOX1Q9Y5S8 564 aa19.55■□□□□ 0.72
SSBP4-203ENST00000593641 A0A087WUJ7 227 aa19.54■□□□□ 0.72
SSBP4-203ENST00000593641 MS4A18H0YCH9 400 aa19.54■□□□□ 0.72
SSBP4-203ENST00000593641 M0R233 179 aa19.54■□□□□ 0.72
SSBP4-203ENST00000593641 PPIBP23284 216 aaKnown RBP19.54■□□□□ 0.72
SSBP4-203ENST00000593641 EVX1P49640 407 aa19.54■□□□□ 0.72
SSBP4-203ENST00000593641 CDH15P55291 814 aa19.54■□□□□ 0.72
SSBP4-203ENST00000593641 RGS8P57771 180 aaPredicted RBP19.54■□□□□ 0.72
SSBP4-203ENST00000593641 TRIP10Q15642 601 aa19.54■□□□□ 0.72
SSBP4-203ENST00000593641 TRMT5Q32P41 509 aaKnown RBP19.54■□□□□ 0.72
SSBP4-203ENST00000593641 MS4A18Q3C1V0 323 aa19.54■□□□□ 0.72
SSBP4-203ENST00000593641 OR6S1Q8NH40 331 aa19.54■□□□□ 0.72
SSBP4-203ENST00000593641 MRPL24Q96A35 216 aaKnown RBP19.54■□□□□ 0.72
SSBP4-203ENST00000593641 SLC41A3Q96GZ6 507 aa19.54■□□□□ 0.72
SSBP4-203ENST00000593641 ULBP2Q9BZM5 246 aa19.54■□□□□ 0.72
SSBP4-203ENST00000593641 PRORSD1PA6NEY8 169 aa19.53■□□□□ 0.72
SSBP4-203ENST00000593641 ZNF726A6NNF4 738 aa19.53■□□□□ 0.72
SSBP4-203ENST00000593641 SYNGR3O43761 229 aa19.53■□□□□ 0.72
SSBP4-203ENST00000593641 HPRP00739 348 aa19.53■□□□□ 0.72
SSBP4-203ENST00000593641 HLA-DOBP13765 273 aa19.53■□□□□ 0.72
SSBP4-203ENST00000593641 B4GALT1P15291 398 aa19.53■□□□□ 0.72
SSBP4-203ENST00000593641 HOXB9P17482 250 aaPredicted RBP19.53■□□□□ 0.72
SSBP4-203ENST00000593641 PIGFQ07326 219 aa19.53■□□□□ 0.72
SSBP4-203ENST00000593641 PUDPQ08623 228 aa19.53■□□□□ 0.72
SSBP4-203ENST00000593641 PMS2P3Q13401 168 aa19.53■□□□□ 0.72
SSBP4-203ENST00000593641 CCNIQ14094 377 aa19.53■□□□□ 0.72
SSBP4-203ENST00000593641 GKAP1Q5VSY0 366 aaPredicted RBP19.53■□□□□ 0.72
SSBP4-203ENST00000593641 COMTD1Q86VU5 262 aa19.53■□□□□ 0.72
SSBP4-203ENST00000593641 C10orf53Q8N6V4 93 aa19.53■□□□□ 0.72
SSBP4-203ENST00000593641 BHLHE22Q8NFJ8 381 aaPredicted RBP19.53■□□□□ 0.72
SSBP4-203ENST00000593641 OR6N1Q8NGY5 312 aa19.53■□□□□ 0.72
SSBP4-203ENST00000593641 MS4A3Q96HJ5 214 aa19.53■□□□□ 0.72
SSBP4-203ENST00000593641 MRPL37Q9BZE1 423 aaKnown RBP19.53■□□□□ 0.72
SSBP4-203ENST00000593641 MS4A5Q9H3V2 200 aa19.53■□□□□ 0.72
SSBP4-203ENST00000593641 MED29Q9NX70 200 aa19.53■□□□□ 0.72
SSBP4-203ENST00000593641 B3GNT2Q9NY97 397 aa19.53■□□□□ 0.72
SSBP4-203ENST00000593641 SLC25A37Q9NYZ2 338 aa19.53■□□□□ 0.72
SSBP4-203ENST00000593641 REV1Q9UBZ9 1251 aa19.53■□□□□ 0.72
SSBP4-203ENST00000593641 USH1CQ9Y6N9 552 aa19.53■□□□□ 0.72
SSBP4-203ENST00000593641 LYNX1G3V0Z9 82 aa19.52■□□□□ 0.72
SSBP4-203ENST00000593641 POLR3GO15318 223 aaPredicted RBP19.52■□□□□ 0.72
SSBP4-203ENST00000593641 RAB36O95755 333 aa19.52■□□□□ 0.72
SSBP4-203ENST00000593641 IGFBP1P08833 259 aaPredicted RBP19.52■□□□□ 0.72
SSBP4-203ENST00000593641 LYNX1P0DP58 116 aa19.52■□□□□ 0.72
SSBP4-203ENST00000593641 PTDSS1P48651 473 aaKnown RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms