RNA–Protein interactions for RNA: ENST00000592546.5

RFX2-222, Transcript of regulatory factor X2, human

APPRIS ALT1 TSL 2 BASIC

Gene RFX2, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-222	ENST00000592546	PPIA	P62937	165 aa	Known RBP	13.21	□□□□□ -0.3
RFX2-222	ENST00000592546	UBE2I	P63279	158 aa	Known RBP	13.21	□□□□□ -0.3
RFX2-222	ENST00000592546	GGTLC2	Q14390	218 aa		13.21	□□□□□ -0.3
RFX2-222	ENST00000592546	GAS6	Q14393	721 aa		13.21	□□□□□ -0.3
RFX2-222	ENST00000592546	PDGFRL	Q15198	375 aa		13.21	□□□□□ -0.3
RFX2-222	ENST00000592546	IGSF11	Q5DX21	431 aa		13.21	□□□□□ -0.3
RFX2-222	ENST00000592546	ABHD17C	Q6PCB6	329 aa		13.21	□□□□□ -0.3
RFX2-222	ENST00000592546	FAM111B	Q6SJ93	734 aa		13.21	□□□□□ -0.3
RFX2-222	ENST00000592546	OR2W3	Q7Z3T1	314 aa		13.21	□□□□□ -0.3
RFX2-222	ENST00000592546	CBLN2	Q8IUK8	224 aa		13.21	□□□□□ -0.3
RFX2-222	ENST00000592546	OR51L1	Q8NGJ5	315 aa		13.21	□□□□□ -0.3
RFX2-222	ENST00000592546	MS4A6E	Q96DS6	147 aa		13.21	□□□□□ -0.3
RFX2-222	ENST00000592546	MS4A4E	Q96PG1	132 aa		13.21	□□□□□ -0.3
RFX2-222	ENST00000592546	FAM117A	Q9C073	453 aa		13.21	□□□□□ -0.3
RFX2-222	ENST00000592546	CHST6	Q9GZX3	395 aa		13.21	□□□□□ -0.3
RFX2-222	ENST00000592546	APMAP	Q9HDC9	416 aa		13.21	□□□□□ -0.3
RFX2-222	ENST00000592546	MED31	Q9Y3C7	131 aa		13.21	□□□□□ -0.3
RFX2-222	ENST00000592546	IFNG	P01579	166 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	THBS1	P07996	1170 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	ADCYAP1	P18509	176 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	FCAR	P24071	287 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	ITPKB	P27987	946 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	PBX2	P40425	430 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	TNFRSF17	Q02223	184 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	TCEA2	Q15560	299 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	CST6	Q15828	149 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	ZIC1	Q15915	447 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	AMZ1	Q400G9	498 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	DHRS7B	Q6IAN0	325 aa	Predicted RBP	13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	ARHGAP11A	Q6P4F7	1023 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	VIT	Q6UXI7	678 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	DND1	Q8IYX4	353 aa	Known RBP	13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	SDR9C7	Q8NEX9	313 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	TMEM185B	Q9H7F4	350 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	YBX2	Q9Y2T7	364 aa	Known RBP	13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	SNRNP200	O75643	2136 aa	Known RBP	13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	RAB19	A4D1S5	217 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	SYNDIG1L	A6NDD5	238 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	RAB28	P51157	221 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	DCD	P81605	110 aa	Known RBP	13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	ARHGAP11B	Q3KRB8	267 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	C4orf46	Q504U0	113 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	MANEA	Q5SRI9	462 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	STAC2	Q6ZMT1	411 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	ARMC10	Q8N2F6	343 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	OR52E2	Q8NGJ4	325 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	OR51S1	Q8NGJ8	323 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	DUSP19	Q8WTR2	217 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	PHYHIPL	Q96FC7	376 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	ZNF75A	Q96N20	296 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	TNFRSF13C	Q96RJ3	184 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	PLA2G2F	Q9BZM2	168 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	GAREM1	Q9H706	876 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	TAS2R8	Q9NYW2	309 aa		13.2	□□□□□ -0.3
RFX2-222	ENST00000592546	USP34	Q70CQ2	3546 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	KANTR	A0A1W2PQU2	76 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	IDS	B3KWA1	339 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	ZFPL1	O95159	310 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	CSF1	P09603	554 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	ADRA2C	P18825	462 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	CERS1	P27544	350 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	NANOS3	P60323	173 aa	Known RBP	13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	PLA2G7	Q13093	441 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	RUNX3	Q13761	415 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	ZNF345	Q14585	488 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	BOLL	Q8N9W6	283 aa	Known RBP	13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	OR7G2	Q8NG99	324 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	OR14A16	Q8NHC5	309 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	ADAT1	Q9BUB4	502 aa	Known RBP	13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	ALX4	Q9H161	411 aa	Predicted RBP	13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	PRDM9	Q9NQV7	894 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	SPHK1	Q9NYA1	384 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	USP36	Q9P275	1121 aa	Known RBP	13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	ZNF230	Q9UIE0	474 aa	Predicted RBP	13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	SERTAD3	Q9UJW9	196 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	PCDHB10	Q9UN67	800 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	TBC1D3K	A0A087X1G2	549 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	TBC1D3F	A6NER0	549 aa	Predicted RBP	13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	BCL2L11	O43521	198 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	XRCC3	O43542	346 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	CD8A	P01732	235 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	SLC6A6	P31641	620 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	PAN3	Q58A45	887 aa	Known RBP	13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	MRPL2	Q5T653	305 aa	Known RBP	13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	TBC1D3G	Q6DHY5	549 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	MAMSTR	Q6ZN01	415 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	OR1S2	Q8NGQ3	325 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	GLYATL2	Q8WU03	294 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	SFT2D1	Q8WV19	159 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	SDF2	Q99470	211 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	C1orf198	Q9H425	327 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	IL21R	Q9HBE5	538 aa		13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	WSB2	Q9NYS7	404 aa	Predicted RBP	13.19	□□□□□ -0.3
RFX2-222	ENST00000592546	C2orf16	Q68DN1	1984 aa		13.18	□□□□□ -0.3
RFX2-222	ENST00000592546	LINC00587	B1AMM8	73 aa		13.18	□□□□□ -0.3
RFX2-222	ENST00000592546	OR2F2	O95006	317 aa		13.18	□□□□□ -0.3
RFX2-222	ENST00000592546	AGR2	O95994	175 aa		13.18	□□□□□ -0.3
RFX2-222	ENST00000592546	IFNA4	P05014	189 aa		13.18	□□□□□ -0.3
RFX2-222	ENST00000592546	CEACAM5	P06731	702 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms