RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 C8BP07358 591 aa16.35■□□□□ 0.21
CCDC43-205ENST00000592333 APEHP13798 732 aaKnown RBP16.35■□□□□ 0.21
CCDC43-205ENST00000592333 ZNF23P17027 643 aa16.35■□□□□ 0.21
CCDC43-205ENST00000592333 HGFACQ04756 655 aa16.35■□□□□ 0.21
CCDC43-205ENST00000592333 SCARB2Q14108 478 aa16.35■□□□□ 0.21
CCDC43-205ENST00000592333 MS4A18Q3C1V0 323 aa16.35■□□□□ 0.21
CCDC43-205ENST00000592333 RANBP3LQ86VV4 465 aaPredicted RBP16.35■□□□□ 0.21
CCDC43-205ENST00000592333 C20orf196Q8IYI0 205 aa16.35■□□□□ 0.21
CCDC43-205ENST00000592333 HIPK4Q8NE63 616 aa16.35■□□□□ 0.21
CCDC43-205ENST00000592333 LRRC8CQ8TDW0 803 aa16.35■□□□□ 0.21
CCDC43-205ENST00000592333 HPS1Q92902 700 aa16.35■□□□□ 0.21
CCDC43-205ENST00000592333 ZBTB9Q96C00 473 aa16.35■□□□□ 0.21
CCDC43-205ENST00000592333 FOXN4Q96NZ1 517 aa16.35■□□□□ 0.21
CCDC43-205ENST00000592333 DOK1Q99704 481 aa16.35■□□□□ 0.21
CCDC43-205ENST00000592333 RSPO3Q9BXY4 272 aaPredicted RBP16.35■□□□□ 0.21
CCDC43-205ENST00000592333 MRPL39Q9NYK5 338 aaKnown RBP16.35■□□□□ 0.21
CCDC43-205ENST00000592333 SLAMF8Q9P0V8 285 aa16.35■□□□□ 0.21
CCDC43-205ENST00000592333 SLC13A4Q9UKG4 626 aa16.35■□□□□ 0.21
CCDC43-205ENST00000592333 FBXL3Q9UKT7 428 aa16.35■□□□□ 0.21
CCDC43-205ENST00000592333 IGHV2OR16-5A0A0B4J2B6 119 aa16.34■□□□□ 0.21
CCDC43-205ENST00000592333 PHF1O43189 567 aaPredicted RBP16.34■□□□□ 0.21
CCDC43-205ENST00000592333 MT-ATP6P00846 226 aa16.34■□□□□ 0.21
CCDC43-205ENST00000592333 NQO1P15559 274 aaKnown RBP16.34■□□□□ 0.21
CCDC43-205ENST00000592333 HNF1AP20823 631 aa16.34■□□□□ 0.21
CCDC43-205ENST00000592333 RGS8P57771 180 aaPredicted RBP16.34■□□□□ 0.21
CCDC43-205ENST00000592333 RBBP4Q09028 425 aa16.34■□□□□ 0.21
CCDC43-205ENST00000592333 GGTLC2Q14390 218 aa16.34■□□□□ 0.21
CCDC43-205ENST00000592333 OR1Q1Q15612 314 aa16.34■□□□□ 0.21
CCDC43-205ENST00000592333 NHLRC1Q6VVB1 395 aa16.34■□□□□ 0.21
CCDC43-205ENST00000592333 PXKQ7Z7A4 578 aa16.34■□□□□ 0.21
CCDC43-205ENST00000592333 PRR14Q9BWN1 585 aa16.34■□□□□ 0.21
CCDC43-205ENST00000592333 B3GNT2Q9NY97 397 aa16.34■□□□□ 0.21
CCDC43-205ENST00000592333 SEC14L4Q9UDX3 406 aa16.34■□□□□ 0.21
CCDC43-205ENST00000592333 SPEF1Q9Y4P9 236 aa16.34■□□□□ 0.21
CCDC43-205ENST00000592333 LOC100289279A0A1B0GTE1 492 aa16.33■□□□□ 0.2
CCDC43-205ENST00000592333 TPST1O60507 370 aa16.33■□□□□ 0.2
CCDC43-205ENST00000592333 ENTPD5O75356 428 aa16.33■□□□□ 0.2
CCDC43-205ENST00000592333 BGLAPP02818 100 aa16.33■□□□□ 0.2
CCDC43-205ENST00000592333 ZNF16P17020 682 aaPredicted RBP16.33■□□□□ 0.2
CCDC43-205ENST00000592333 TUBA1BP68363 451 aa16.33■□□□□ 0.2
CCDC43-205ENST00000592333 TUBA4AP68366 448 aa16.33■□□□□ 0.2
CCDC43-205ENST00000592333 PUDPQ08623 228 aa16.33■□□□□ 0.2
CCDC43-205ENST00000592333 ADRM1Q16186 407 aa16.33■□□□□ 0.2
CCDC43-205ENST00000592333 PAGE3Q5JUK9 113 aa16.33■□□□□ 0.2
CCDC43-205ENST00000592333 ZNF613Q6PF04 617 aa16.33■□□□□ 0.2
CCDC43-205ENST00000592333 TUBA1AQ71U36 451 aa16.33■□□□□ 0.2
CCDC43-205ENST00000592333 ARMC8Q8IUR7 673 aa16.33■□□□□ 0.2
CCDC43-205ENST00000592333 PHC2Q8IXK0 858 aa16.33■□□□□ 0.2
CCDC43-205ENST00000592333 ZNF786Q8N393 782 aa16.33■□□□□ 0.2
CCDC43-205ENST00000592333 MSI2Q96DH6 328 aaKnown RBP16.33■□□□□ 0.2
CCDC43-205ENST00000592333 ANGPT4Q9Y264 503 aa16.33■□□□□ 0.2
CCDC43-205ENST00000592333 hCG_2039718K7EN88 272 aa16.32■□□□□ 0.2
CCDC43-205ENST00000592333 MFN2O95140 757 aa16.32■□□□□ 0.2
CCDC43-205ENST00000592333 STAMBPO95630 424 aa16.32■□□□□ 0.2
CCDC43-205ENST00000592333 VIMP08670 466 aaKnown RBP16.32■□□□□ 0.2
CCDC43-205ENST00000592333 TACSTD2P09758 323 aa16.32■□□□□ 0.2
CCDC43-205ENST00000592333 SRD5A1P18405 259 aa16.32■□□□□ 0.2
CCDC43-205ENST00000592333 NR4A1P22736 598 aa16.32■□□□□ 0.2
CCDC43-205ENST00000592333 THBS4P35443 961 aa16.32■□□□□ 0.2
CCDC43-205ENST00000592333 IL1RL1Q01638 556 aa16.32■□□□□ 0.2
CCDC43-205ENST00000592333 DAG1Q14118 895 aa16.32■□□□□ 0.2
CCDC43-205ENST00000592333 SQLEQ14534 574 aa16.32■□□□□ 0.2
CCDC43-205ENST00000592333 GSG1Q2KHT4 349 aa16.32■□□□□ 0.2
CCDC43-205ENST00000592333 IQCCQ4KMZ1 466 aa16.32■□□□□ 0.2
CCDC43-205ENST00000592333 VHLLQ6RSH7 139 aa16.32■□□□□ 0.2
CCDC43-205ENST00000592333 LINC00114Q6XXX2 140 aa16.32■□□□□ 0.2
CCDC43-205ENST00000592333 MDP1Q86V88 176 aa16.32■□□□□ 0.2
CCDC43-205ENST00000592333 COMTD1Q86VU5 262 aa16.32■□□□□ 0.2
CCDC43-205ENST00000592333 SLC30A8Q8IWU4 369 aa16.32■□□□□ 0.2
CCDC43-205ENST00000592333 C10orf111Q8N326 155 aa16.32■□□□□ 0.2
CCDC43-205ENST00000592333 ANKS4BQ8N8V4 417 aa16.32■□□□□ 0.2
CCDC43-205ENST00000592333 TSPEARQ8WU66 669 aa16.32■□□□□ 0.2
CCDC43-205ENST00000592333 ZNF837Q96EG3 531 aaPredicted RBP16.32■□□□□ 0.2
CCDC43-205ENST00000592333 EBF4Q9BQW3 602 aa16.32■□□□□ 0.2
CCDC43-205ENST00000592333 CMAHPQ9Y471 501 aa16.32■□□□□ 0.2
CCDC43-205ENST00000592333 IGHV4-61A0A0C4DH41 118 aa16.31■□□□□ 0.2
CCDC43-205ENST00000592333 TMEM129A0AVI4 362 aa16.31■□□□□ 0.2
CCDC43-205ENST00000592333 ZNF726A6NNF4 738 aa16.31■□□□□ 0.2
CCDC43-205ENST00000592333 M0R3G1 203 aa16.31■□□□□ 0.2
CCDC43-205ENST00000592333 CELA3BP08861 270 aa16.31■□□□□ 0.2
CCDC43-205ENST00000592333 DAOP14920 347 aa16.31■□□□□ 0.2
CCDC43-205ENST00000592333 IGFBP5P24593 272 aa16.31■□□□□ 0.2
CCDC43-205ENST00000592333 CHN2P52757 468 aa16.31■□□□□ 0.2
CCDC43-205ENST00000592333 AQP5P55064 265 aa16.31■□□□□ 0.2
CCDC43-205ENST00000592333 PCBP3P57721 371 aaKnown RBP16.31■□□□□ 0.2
CCDC43-205ENST00000592333 PMS2P3Q13401 168 aa16.31■□□□□ 0.2
CCDC43-205ENST00000592333 GLIPR1L2Q4G1C9 344 aa16.31■□□□□ 0.2
CCDC43-205ENST00000592333 AGKQ53H12 422 aa16.31■□□□□ 0.2
CCDC43-205ENST00000592333 RUNDC3AQ59EK9 446 aa16.31■□□□□ 0.2
CCDC43-205ENST00000592333 DLEU7Q6UYE1 221 aa16.31■□□□□ 0.2
CCDC43-205ENST00000592333 SPATA21Q7Z572 469 aa16.31■□□□□ 0.2
CCDC43-205ENST00000592333 LSRQ86X29 649 aaPredicted RBP16.31■□□□□ 0.2
CCDC43-205ENST00000592333 DPP10Q8N608 796 aa16.31■□□□□ 0.2
CCDC43-205ENST00000592333 C11orf65Q8NCR3 313 aa16.31■□□□□ 0.2
CCDC43-205ENST00000592333 BPESC1Q9GZL8 116 aa16.31■□□□□ 0.2
CCDC43-205ENST00000592333 MS4A5Q9H3V2 200 aa16.31■□□□□ 0.2
CCDC43-205ENST00000592333 SEC61A2Q9H9S3 476 aa16.31■□□□□ 0.2
CCDC43-205ENST00000592333 NOX3Q9HBY0 568 aa16.31■□□□□ 0.2
CCDC43-205ENST00000592333 SLCO1B3Q9NPD5 702 aa16.31■□□□□ 0.2
CCDC43-205ENST00000592333 LEF1Q9UJU2 399 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms